| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3153 |
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| Symbol | |
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| ID | 7874295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3412440 |
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| End bp | 3414275 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643700083 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002890127 |
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| Protein GI | 237653813 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.880898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCG CGCAGGAACT GCTCGACGAG CTCAATGCCA GCGACGAGTC GCCGCGCATC
GAGGCCAAGC GTGCGCGGGA GGTCGGCAAG TCGGTGCTGG AGACCGTCAT CGCCTTTGCC
AACGAGCCCG GCATGGACGG CGGCCACTTG CTGCTCGGCG TCGATTGGTC GATCAACGAC
AAGGGCGACA CCGTTTATCG CCCCGAGGGT GTGCCCGACC CCGACAAGCT GCAGCAGGAT
CTGGCCTCGC AATGCGCGAG CATGCTCAGT TTTCCATTGC GTCCGGAAAT CAGCGTCGAG
CGTATCGACG GCAAGACCCT GGTCGTGGTG TATGTGGCCG AGGTGGATAG CGGGCACAAG
CCGGTCTATC TCAAGGCCAC CGGCCTGCCG CGCGGAGCCT TCCGCCGCAT CGGATCGACC
GACCAGCGCT GCACCGACGA GGATCTGTGG GTGCTGCGCG GCGACACCCG CCCGCAGAAG
GGGCCGGACC AGAGCATTCT CACCGATGCA CGCCTGGACG ATTTCGACCC CGCCGCGCTG
GCCGAATACC GCCGCGTGCG CAGCCGCTTG AACGCCAGCG CCGAGGAGCT CGGTTACGGT
GACGACGATC TGCTCGAGGC GCTCGGCGCG GTGCGCCGCG TCGATGGCGA GCCGCGCCCC
ACGTTGGCCG GCATCCTGCT GTTCGGCAAA CCGATGGCGC TGCGCCGCAT GCTGCCGATG
GTCAAGATCG ACTACATCCG CGTGCCGGGC ATCGAGTGGA TGGAGGACCC GCACGAGCGC
TTCCAGTCCA TCGAGATCCG CAAGCCGCTG CTGCTGGCGC TGCCCCTGGC CGAAGCCAGC
ATCATCGACG AGCTGCCCAA GGGTTTTCAT CTGCCCGAGG GCGAACTGCA CAGCGTCCAG
GAGCCGATCG TCCCGCGCAA GGTGATCCGC GAGGCGCTGG CCAATGCGGT GATGCACCGC
AGCTACACGC AGCACAGCCC GATCCAGATC ATCCGCTACA GCAACCGCAT CGAGATCCGC
AACGTCGGCC ACTCGCTCAA GCCCGTGGCC GAGCTTGGCA TTCCGGGCTC ACGGCTGCGC
AACCCCACCC TGTCCGCCGT GCTCCACGAC TTGAACCTGG CCGAAGCCAA AGGCACCGGC
ATCCGCAGCA TGCGCAGGCT GGCCGCCGAG GCGGGACTGA CGCTGCCCGA GTTTCACTCC
AGCCGCGAGT CGGACGAGTT CCGCGTCACG CTTTTCCTGC ACAACCTGCT CACCGAGGAC
GACCACGCCT GGCTGCGCTC GCTGAGCAGC GAGCCGCTGG ATGCCGACGA AACCAAGGTG
CTGATTTACG CTCGCGCCAC CGGTGCGGTG GACAACACGG CGTGCCGCGA CTTCAGCGGG
CTGGACACGC TGACCGCCAG CCGCGTGCTG CGCCGCCTGC GAGACAAGGG TTTGCTGGAA
AAACATGGAG GCGGCAGCCA CACGTATTAC GAACTGGCCA GCCCAACAAT CCCCACGCCG
CTTGCAATCC ACCCAAGCTC AAGTGCGCCA GCAGGGGAGG CTTGCAACCC AAAGCATGCA
ACCTTGCCTC TCGAGCTTGC AACCTTGCTT GCAACCCTAC AGGGCCGCGT CAGCACGGAA
GCCTTGCGTG GAGGCATTGT GCGCCTGTGC GCATGGCAGG CTTTGGGCGT GGACCAGCTT
GCAAGTTTTC TGAACAAAGA CCGGCACTAC TTGCGCAACA AGCACCTGAT TCCAATGGTG
CGAGAGGGGC AGCTGCGCTT TCGCTACCCC GAAAGCGCTA AACACCCGCA CCAGGCCTAT
GTCGCCGCCG GCGCGGAGGA CAGGAACAAT GGCTGA
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| Protein sequence | MRSAQELLDE LNASDESPRI EAKRAREVGK SVLETVIAFA NEPGMDGGHL LLGVDWSIND
KGDTVYRPEG VPDPDKLQQD LASQCASMLS FPLRPEISVE RIDGKTLVVV YVAEVDSGHK
PVYLKATGLP RGAFRRIGST DQRCTDEDLW VLRGDTRPQK GPDQSILTDA RLDDFDPAAL
AEYRRVRSRL NASAEELGYG DDDLLEALGA VRRVDGEPRP TLAGILLFGK PMALRRMLPM
VKIDYIRVPG IEWMEDPHER FQSIEIRKPL LLALPLAEAS IIDELPKGFH LPEGELHSVQ
EPIVPRKVIR EALANAVMHR SYTQHSPIQI IRYSNRIEIR NVGHSLKPVA ELGIPGSRLR
NPTLSAVLHD LNLAEAKGTG IRSMRRLAAE AGLTLPEFHS SRESDEFRVT LFLHNLLTED
DHAWLRSLSS EPLDADETKV LIYARATGAV DNTACRDFSG LDTLTASRVL RRLRDKGLLE
KHGGGSHTYY ELASPTIPTP LAIHPSSSAP AGEACNPKHA TLPLELATLL ATLQGRVSTE
ALRGGIVRLC AWQALGVDQL ASFLNKDRHY LRNKHLIPMV REGQLRFRYP ESAKHPHQAY
VAAGAEDRNN G
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