Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3121 |
Symbol | |
ID | 7874263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3377405 |
End bp | 3377998 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643700049 |
Product | polyhydroxyalkonate synthesis repressor, PhaR |
Protein accession | YP_002890095 |
Protein GI | 237653781 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.961467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGAAC AGCAGCGACT GATCAAGAAG TACCCGAACC GCCGTCTGTA CGACACGCGG ACCAGTTCCT ACATCACCCT GGCCGACGTC AAGGACTTGG TGCTCGGTCA CGAGCACTTC CAGGTGGTCG ATGCGAAGAC CGGCGAGGAC CTGACGCGCA GCATCCTGCT CCAGATCATC CTCGAGGAAG AGGCGGGGGG CGCGCCGATG TTCACCAGCG ACCTGCTCGC GCACATGATC CGCTTCTACG GCAATGCCAT GCAGGGCATG ATGGGCAAGT ACCTCGAGAG CAACATCAAG GCCTTCACCG AGATGCAGGT CAAGCTCCAG GACCAGGCGC GCGCGATCTA TGGCGAGAAC AGCCCGGTGG GCCAGGACCT GTGGGCGCAG TTCCTCAACT TCCAGGGGCC CGCGCTGCAG AGCATGATGG GCGCCTACGT CGACCAGTCG AAGAAGATGT TCGAGCAGAT GCAGACGCAG CTCGAGAGCC AGACGCGCAA CATGTTCACC GGCTTCCAGT TCCCGGGCTA CGTCCGTCCC GAGGACGCCG AATCCGCCGC GCCCGCCGCG CTCAAGGGCG ACGGCAAGAA GTGA
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Protein sequence | MPEQQRLIKK YPNRRLYDTR TSSYITLADV KDLVLGHEHF QVVDAKTGED LTRSILLQII LEEEAGGAPM FTSDLLAHMI RFYGNAMQGM MGKYLESNIK AFTEMQVKLQ DQARAIYGEN SPVGQDLWAQ FLNFQGPALQ SMMGAYVDQS KKMFEQMQTQ LESQTRNMFT GFQFPGYVRP EDAESAAPAA LKGDGKK
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