Gene Tmz1t_3069 details

Gene Information

• Locus tag: Tmz1t_3069
• Symbol: leuD
• ID: 7874539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 3323969
• End bp: 3324607
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643699992
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_002890044
• Protein GI: 237653730
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCGT TTACCCAGCT CGACGGGCTG GTCGCGCCGC TCGACCGCGC CAACGTCGAT 
ACCGACGCGA TCATCCCCAA GCAGTTCCTC AAGTCGATCA AGCGCAGCGG CTTCGGCCCC 
AACGCCTTCG ACGAGTGGCG CTACCTCGAC GTCGGCCAGC CCGGCGCGGA CAACAGCAAG 
CGTCCGCTCA ACCCCGACTT CGTGCTCAAC CAGGCGCGCT ACCAGGGCGC GCAGATCCTC 
CTCACCCGCG ACAACTTCGG TTGCGGCAGC TCGCGCGAGC ACGCGCCGTG GGCGCTCGAG 
GACTACGGCT TTCGCGTGCT GATCGGGCCG AGCTTCGCTG ACATCTTCTT CAACAACAGC 
TTCAAGAACG GCCTGCTGCC GATCAAGCTG GATGCCGCAG AGGTCGACGA GCTGTTCCGC 
CAGTGCGAGG CCAGCGCGGG CTACCGCCTG AAGGTCGACC TCGCCGCGCA GACGATCACC 
CGCCCGGACG GCAAGTCGAT CGCCTTCGAC ATCGACCCCT TCCGCAAGGA ATGCCTGCTC 
AACGGCTGGG ACGACATCGG CCTCACGCTG CGCCACGCCG ACAAGATCCG CGCCTTTGAA 
GAGCAGCGCC GCGCCCAACA CCCTTATTAC TTTGCCTGA 

 

Protein sequence

MKPFTQLDGL VAPLDRANVD TDAIIPKQFL KSIKRSGFGP NAFDEWRYLD VGQPGADNSK 
RPLNPDFVLN QARYQGAQIL LTRDNFGCGS SREHAPWALE DYGFRVLIGP SFADIFFNNS 
FKNGLLPIKL DAAEVDELFR QCEASAGYRL KVDLAAQTIT RPDGKSIAFD IDPFRKECLL 
NGWDDIGLTL RHADKIRAFE EQRRAQHPYY FA