Gene Tmz1t_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3010 
Symbol 
ID7874399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3261229 
End bp3262230 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content74% 
IMG OID643699931 
Productprotein of unknown function DUF58 
Protein accessionYP_002889985 
Protein GI237653671 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.29026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCC CCGCCGCATC GCTCGCCACG CCGCTGCGCC ACGCCGCCGA CCGCTGGCTG 
TTCCGCATCG GCGCCCCGGA GCCCGCGCCG ATCCGCCTCG GCCAACGCCG CATCTACGTG
CTGCCGAGCG CCGCGGGCAT CGGCTTCGCC TTCGCGCTGC TGGTGATGCT GATCGCGGCG
ATCAACTACA ACCTGAGCCT CGGTTACGCG CTCGTGTTCA CCCTCGGCGG CAGCGCCGCA
GCGAGCATGG TGCACGCCTT CCGCAACCTC CATGGCCTGT CGATCCGCCC GGGGCGCTGC
GCACCGGTGT TCGCGGGCGA GACTGCCGTG TTCTCCCTCC TGGTCGATAA CCCCGCCCCG
CGACGACGTC CTGCCTTGCG CCTCGCCGCG CACGGGCAAT GGAGCGCATT CGCGCTCCCC
CCCGCACAGG AAAGCGCCGT CACGCTGGCC TGCCCCGCGC TCCGGCGCGG CCGGCTCGCG
CTCGGGCGCA GCGTGCTCGA GACGCACTGG CCGCTCGGCC TCATCCGCGC CTGGAGCGTG
TTCGTCCCCG AGGCCGAGTG CCTGGTGCTG CCCACGCCGG AGTCCGATCC GCCGCCCCTG
CCCCTCGATG CAGGCGGCGA TGCCGACGGC GGCCGGCGCG CACGCGAGGG CGACGACGAC
TTCGCCGGCC TGCGCGCGCA TCGCAGCGCC GACTCGCCGC GCCATGTGGC GTGGAAGGTG
CTCGCGCGCG GAGGTCCGAT GCTGACCAAG GAGTTCGCCG CCGGACAGGA GCGCGCGCTC
CTGCTCGACT GGGAGCGTCT TCCAGCCGGA CTCGACGACG AACGCCGGCT GTCGCGGCTC
ACCGCCTGGG TGCTCGCCGC CGAGCGCGAA GGCCTGCGCT ACGCGCTCGC GCTGCCCGGC
GTGCGCGTGC CTGCGGCGAA CGGCAGCGCC CATCACGCAC GCTGCCTGCG CCTGCTCGCA
CTCCATGGGC TTGCCGACGC AGCGGTGGAG GACGCAGCGT GA
 
Protein sequence
MARPAASLAT PLRHAADRWL FRIGAPEPAP IRLGQRRIYV LPSAAGIGFA FALLVMLIAA 
INYNLSLGYA LVFTLGGSAA ASMVHAFRNL HGLSIRPGRC APVFAGETAV FSLLVDNPAP
RRRPALRLAA HGQWSAFALP PAQESAVTLA CPALRRGRLA LGRSVLETHW PLGLIRAWSV
FVPEAECLVL PTPESDPPPL PLDAGGDADG GRRAREGDDD FAGLRAHRSA DSPRHVAWKV
LARGGPMLTK EFAAGQERAL LLDWERLPAG LDDERRLSRL TAWVLAAERE GLRYALALPG
VRVPAANGSA HHARCLRLLA LHGLADAAVE DAA