Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2895 |
Symbol | |
ID | 7873797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 3136293 |
End bp | 3137084 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643699816 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_002889871 |
Protein GI | 237653557 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.483653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGAAC TCAGCACCCC AAGCCCCGCC AGCCCGGCAC CGCTCGACGG CGGACGCGGC GACGAGCTCG AGAAATTCAC CCTGCGCGGC GCGCGCCAGA TCCTGCAGCT GCTGCAGGAT CTCATCACCC ACCGCGGCTT GATCACCGCC CACACCGGCG GCGGCCACTC CTTCATGACC GCGGTGCTGA AGGTGGACGA AGAGCGCGGG CGCGTGGTGC TCGACCCCAG CCCCGACCCC CAGGCCAACC GCCGTGCGCT CGCCGCGCCG CGCCTGACCT GCGTGACCCA GCTCGACGGC ATCCGCATCC AGTTCCCGCT CGTCGGCCTC GGCGAAGGCC AGGACAAGGG CCGCCCCGCC CTCTTCGCAC CCCTGCCCGC CGAGATGCTG CGCCTGCAGC GGCGCGAGTT CTACCGCCTG CAGGTACCGC TCGCGCACGA GCTGAGCTGC CTGTTGAAAG CGGAGGACCT CGCCCGCAAG CCGGTGGAGG TGAGCGCACG CGTGATCGAC ATCGGTGCCG GAGGGGTGGC GGTGGTGGTG CCCACGGGGG CGGCGGAATT CGTCATCGGC GGCACACTGC CGGCCTGCCG CCTCGCGCTG CCGGACGGCG AGCCGATCGA ACTCGACCTC GAGGTGAGAA ACCTCAACCG CCAGACGCAG CGCAACGGCA CCGAACAACT GCGGGTGGGC CTGCGCTTCG CCGCCCTGCC GCGCGCTGCG GACACCCGCA TCCAGCGCTA CATCTTCAAG ACGGAACGCG CGCTCAACGC CAAGGCACGC GGAGGCCTGT AG
|
Protein sequence | MAELSTPSPA SPAPLDGGRG DELEKFTLRG ARQILQLLQD LITHRGLITA HTGGGHSFMT AVLKVDEERG RVVLDPSPDP QANRRALAAP RLTCVTQLDG IRIQFPLVGL GEGQDKGRPA LFAPLPAEML RLQRREFYRL QVPLAHELSC LLKAEDLARK PVEVSARVID IGAGGVAVVV PTGAAEFVIG GTLPACRLAL PDGEPIELDL EVRNLNRQTQ RNGTEQLRVG LRFAALPRAA DTRIQRYIFK TERALNAKAR GGL
|
| |