Gene Tmz1t_2708 details

Gene Information

• Locus tag: Tmz1t_2708
• ID: 7873450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 2936008
• End bp: 2936622
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643699631
• Product: response regulator receiver protein
• Protein accession: YP_002889687
• Protein GI: 237653373
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
• TIGRFAM ID: [TIGR01764] DNA binding domain, excisionase family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.18523
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGAA AGTCCGACTC CAATTCCGAG TTCATCAGCA CAGCCCAGGC AGCACGCCAG 
CTCGGCCTGT CGCTCGGTGC GGTGCAGCAA ATGGTCGAAA GCGGAACGCT GGCAGGCTGG 
AAGACCGCCG GCGGCCACCG CCGCATCCGC CAGGACTCTG TCGACGCCCT GCTCGCGCAT 
GCGCGCTCGC CCTCGGCACC GATGCGCAGC AACCGTGAGC GCCTGCGCGT GATGGTGGTC 
GAGGACGACC GACTGCTGCA GAACATCTAC CGCGAGACCT TCCTTACCTG GAGCCTGCCG 
CTCGACGTGC ACCTGATGGA GCACGGCCTC GATGCGCTCG TCGAGGTCGG CCGCGAGCCG 
CCCGACCTGC TCATCGCCGA CCTGCGCATC CCGGGCATCG ACGGCTTCGA GATGATCCGC 
CGCCTGCGCG ACAACCCCCT GTCGAGCGAC ATCGCCATCG TCGTGGTGTC CGCGCTCGGT 
CCCAAGGAGA TCGCCGCGGC GGGTGGACTG CCGGAGGACA TCACCGTCTA TCGCAAGCCC 
ATTCCCTTCC ACGAGCTGCA CGGCTACGTC CAGGCGATGA TCTCGATGCG CCGCCGCGCT 
CGCCACCCGG GCTGA 

 

Protein sequence

MAGKSDSNSE FISTAQAARQ LGLSLGAVQQ MVESGTLAGW KTAGGHRRIR QDSVDALLAH 
ARSPSAPMRS NRERLRVMVV EDDRLLQNIY RETFLTWSLP LDVHLMEHGL DALVEVGREP 
PDLLIADLRI PGIDGFEMIR RLRDNPLSSD IAIVVVSALG PKEIAAAGGL PEDITVYRKP 
IPFHELHGYV QAMISMRRRA RHPG