| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2559 |
|---|
| Symbol | |
|---|
| ID | 7873998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2760357 |
|---|
| End bp | 2761091 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643699481 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002889538 |
|---|
| Protein GI | 237653224 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.498875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCT TCGACTTCAA GGTCATCACC GGCAGCTTGC CCGAGTTCTG GCGCGGGCTG
TGGATGACCG TCCAGCTCAC CGGCTTGGCG TTGCTGTTCG GCTTCTTCGT GGCGATCCCG
CTCGCGGTCA TGCGGCTGTC GCCCAACCGT CTGGTGTCGG CCCCGGTCGC GGCCTACACC
TACTTCTTCC GCGGCACGCC GATGCTCGTG CAGCTGCTGC TGGTGTACTA CGGCGCCTCG
CAGTGGGAAT GGATGCGCGC GGCGTGGGAG GCCGGGCATC CGCTGTGGTC GCTGTTCCGC
GAACCCTACT TCTGCGCGCT GTTCGCCTTC GGCCTCAACA CCTGTGCCTA CACCGTCGAG
ATCCTCGCCG GCAGCATGCG CAACACGCCG CACGGGGAGC TCGAGGCCGC CAAGGCGATG
GGCATGACGC GCTTGAAGGC CCTGCAGCGC ATCGTGATCC CGTCGGCGCT ACGGCGCATG
ATCCCGAGCT ACAGCAACGA GGTGATCCTG ATGCTGCAGG GGTCGGCGAT CGCCAGCGCG
GTAACCCTGG TGGACCTCAC CGGTGCGGCG CGCAACGTGT ATTCGCGCCA CTTCGCACCC
TTCGAGTCCT TCGTCTTCGT CGGCCTGATC TACCTCGCGC TCACCTTCGC CCTGGTGGGG
CTGTTCAAGC TCGCCGAGCA CCGCTGGCTC GCCCACCTGG CTCCGCGCAA GGCGGAGGCG
GGCAGGCAGT CCTGA
|
|---|
| Protein sequence | MEFFDFKVIT GSLPEFWRGL WMTVQLTGLA LLFGFFVAIP LAVMRLSPNR LVSAPVAAYT
YFFRGTPMLV QLLLVYYGAS QWEWMRAAWE AGHPLWSLFR EPYFCALFAF GLNTCAYTVE
ILAGSMRNTP HGELEAAKAM GMTRLKALQR IVIPSALRRM IPSYSNEVIL MLQGSAIASA
VTLVDLTGAA RNVYSRHFAP FESFVFVGLI YLALTFALVG LFKLAEHRWL AHLAPRKAEA
GRQS
|
|---|
| |