| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2529 |
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| Symbol | |
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| ID | 7873968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2727193 |
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| End bp | 2729379 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643699451 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_002889508 |
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| Protein GI | 237653194 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.151487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCC TTTCCACCCT CCGACCGCTT CCTCGTTCCT TCCCCGCGCG GGGCCGAGCC
GTGTTGCGCA ATGCGCTGCG CGCGCTCGCC ATTGCCGCGC TCGGCCTCGG CTCGTGCCTC
GTGCACGCCG CGGGCGAGCC GGTGGCGCTC AACTTCCAGA ACGCCGAGAT CGACGCGGTG
ATCCAGGCGA TCGGACGCAT CTCGGGGCGC AACTTTCTCA TCGATCCACG CGTCAAGGGC
AAGATCAACC TCGTCACCAA CACCCCCGTG GCCCCGGAGC TGACCTACCA GATCCTGCTG
TCGGCGCTGC GCCTGCAGGG CTACGCGGCG ATCGAGGAGT CGGGCGTGAC CAAGCTCGTG
CCCGAGGCCG ACGCCAAGCT GCACGGCGTG CCGGTGGTCA GTGGCCGTCC GGGCGCGGGC
GCAGCGCGCG GCGACCGCCT GGTGACCCAG GTGTTCGCGC TGCGCCATGA ATCCGCGGTG
CATATGGTCA ACGTGGTGCG CCCGCTGGTC TCGGCCAACA ACGCGGTCAC CGCCTTCCCC
GGCAACAACA CCCTGGTGGT CACCGACTAC GCCGAGAACC TGCGCCGGCT GGCAACCGTG
ATCGACTCGA TCGACACGCC GCAGGGCGAC GTCGCGGTGC TGCAGCTGCA GCACGCGATG
GCCAACGACC TTGCCCCGGT GCTCGTCCGC CTGCTCGCCG AGCAGCAGAC CGGTGGCCAG
AACGCGGGCG GGCTCGCACC GCCGCAGATC GTCGCCGAAC CCAACAGCAA CAGCCTGCTG
GTGCGTGCCG ACACGCCGAG CCGCCTGGCC GCGCTGCGCC AGCTCGTCAC CGCGCTCGAC
CGTCCGGGCG CGGGCGGCGA CATTCGCGTG GTGTATCTGC GCAACGCCGA CGCCGTCCAG
GTCGCCGCGA CGCTCAATGC CGCGCTCGCC GGGGAGGGCG GCACGAGCGA CGCTGCAAGC
ACGCAGCCGC TGTCGCGCAA CAGCGGCGGC GGCAGTGGCT TCGGCACGGA CAGTTCCGCC
CCGTCCGGAA TGGGCGTCGC CAGCGCCCCC CTGCGCGGCA CCGGCTCCAC CTCCGGCAGC
GCAGCAGGCG GTCTTTCCTC CGCCACGCGC GGCGGCATGG TGCAGCCGGA CGCGGTGAAC
AACGCGCTGA TCATCACCGC GCCCGACGCC GTCTACCGCA ACCTGCGCGC GGTCATCGAC
CAGCTCGACC GCCGCCGTGC GCAGGTCTAC ATCGAGGCGC TGATCGCCGA GATCTCCACC
GAGCGCGCCG CCGAGTTCGG CTTCCAGTGG GTCGCCGGCG CCTCGGCGGG CGAGGTCGGC
GTACTCGGCG CGCAGCTCTT CAACAGCGGC GGCGGCAACC TCGGCCAGCT CATCGCCGGC
AGCGCCGACC GGACCAGGCT GACGCTGCCG AACAATGGCC TCAACCTGGT GGTGGGCGGC
GGCAAGGTCA ACGTGCCCGG CATCGGCGAA GTGCTTAGCC TGGGCGTGCT GGCCCGTTTC
CTCGAGAACG AGGTCAGCGC CAACATCCTG TCCACGCCCA ACCTCATCAC CCTCGACAAC
GAGGAGGCGC GCATCGTCGT CGGTCGCAAC CTGCCCTTCG TCACCGGCCA GTACGCCAAC
ACCGGCGGCG GCACCACGCC CGCCAACCCC TTCCAGACCA TCGAGCGCCG CGATGTCGGC
CTCACCCTGC ACGTCAAGCC GCAGATCTCC GAGGGCGGCG CGATCCGCCT GCAGATCTAC
CAGGAGGCCT CGGCCGTGGT GGGCAGCGCC GAGAGCGCCG CCGCCGGCAA CTCGGTGACC
ACGAAGCGCT CGATCGAGTC CATGGTGCTG GTCGACGACG GCGCCATCCT CGCCCTCGGC
GGACTGGTCG AGGACAGCTA CAGCGGCGGC GAGGAGAAGG TGCCGGTGCT CGGCGACCTC
CCCTTCGCCG GCAGCCTGTT CCGCTACGAC ACGCGCAAGC GCGCCAAGAC CAACCTGGTG
GTGTTCCTGC GCCCGGTGAT CCTGCGCGAC CGCGAAAGCT ACGCCGCGCT CACCGACAGC
CGCTACGACT ACGTGATCGG CCGCCGCGAC CAGCTGCCCT CGGGCGCCAA TCTGCTGCGC
GACCCGCCGC CGGGCGAGCC GGCGCCGGTG GTCGACCTCG CCTTCCGCCC CTTGCAGCCC
GCCGTGACGC CGGCGGCCCC GCGCTGA
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| Protein sequence | MTRLSTLRPL PRSFPARGRA VLRNALRALA IAALGLGSCL VHAAGEPVAL NFQNAEIDAV
IQAIGRISGR NFLIDPRVKG KINLVTNTPV APELTYQILL SALRLQGYAA IEESGVTKLV
PEADAKLHGV PVVSGRPGAG AARGDRLVTQ VFALRHESAV HMVNVVRPLV SANNAVTAFP
GNNTLVVTDY AENLRRLATV IDSIDTPQGD VAVLQLQHAM ANDLAPVLVR LLAEQQTGGQ
NAGGLAPPQI VAEPNSNSLL VRADTPSRLA ALRQLVTALD RPGAGGDIRV VYLRNADAVQ
VAATLNAALA GEGGTSDAAS TQPLSRNSGG GSGFGTDSSA PSGMGVASAP LRGTGSTSGS
AAGGLSSATR GGMVQPDAVN NALIITAPDA VYRNLRAVID QLDRRRAQVY IEALIAEIST
ERAAEFGFQW VAGASAGEVG VLGAQLFNSG GGNLGQLIAG SADRTRLTLP NNGLNLVVGG
GKVNVPGIGE VLSLGVLARF LENEVSANIL STPNLITLDN EEARIVVGRN LPFVTGQYAN
TGGGTTPANP FQTIERRDVG LTLHVKPQIS EGGAIRLQIY QEASAVVGSA ESAAAGNSVT
TKRSIESMVL VDDGAILALG GLVEDSYSGG EEKVPVLGDL PFAGSLFRYD TRKRAKTNLV
VFLRPVILRD RESYAALTDS RYDYVIGRRD QLPSGANLLR DPPPGEPAPV VDLAFRPLQP
AVTPAAPR
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