Gene Tmz1t_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2340 
Symbol 
ID7094262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011667 
Strand
Start bp3912 
End bp4400 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID643701030 
Productnuclease (SNase domain protein) 
Protein accessionYP_002364171 
Protein GI217980121 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGCCG CGATTCTGTT CGTGGCCGGC GTCCAGACCA GCAGCGCCGA TGAACTCACC 
GGCCGCATCA TCTCGGTTGC CGACGGCGAC ACCGTCACTC TGCTCGATGC CAACCTGCGC
CAGCACAAGA TCCGCCTCTC CGGCATCGAT GCCCCCGAAC GCCGGCAGCC GTTCGGCAAC
CGCTCACGGC TGCACCTGGG CGCACTCGTC TTCGGAAGGC AGGTGACGGC CTACTGCCCG
AAAACCGACC GCTACAAGCG CGCGGTGTGC CGGCTCGAGG TCGACGGCGT CGATGCCAAC
CTCGCCCAGC TCGAGGCCGG GATGGCGTGG CACTACAAGG CGTACACGCG GGAGCAGTCC
CCAGCGGACA GGTGGCGCTA CGCGAAAGCG GAAGACCGCG CACGTGACGA ACGGCAGGGC
CTGTGGGCCG ACCGGGCGCC GGTGGCGCCC TGGGACTTCA GGAAGGCGAG GAAAACCACC
GCCCGGTGA
 
Protein sequence
MGAAILFVAG VQTSSADELT GRIISVADGD TVTLLDANLR QHKIRLSGID APERRQPFGN 
RSRLHLGALV FGRQVTAYCP KTDRYKRAVC RLEVDGVDAN LAQLEAGMAW HYKAYTREQS
PADRWRYAKA EDRARDERQG LWADRAPVAP WDFRKARKTT AR