Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2297 |
Symbol | |
ID | 7083729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2583669 |
End bp | 2584277 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643699316 |
Product | LexA repressor |
Protein accession | YP_002355932 |
Protein GI | 217970698 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0763769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCC GTAGCGAAAA CCTCACCGCG CGCCAGCAGG AAATCCTCGA TTTCATCCGC TCCACCGTCG AGTCCGAAGG CCGCCCGCCC ACCCGCGCCG AGGTGTGCAC CGCCTTCGGC TTCCGCTCGC CCAACGCCGC CGAGACCCAC CTGCGCGCGC TCGCCGCCAA GGGCGCGATC CTGCTCGAGG AGGGGCGCGC GCGCGGCATC CGCCTGGCCG AGGCGCTCGG CCTGCCCCTG GTCGGCCGCG TCGCCGCGGG CAGCCCCATC CTCGCCGCCG AACACGTCGA GGCGCGCTAT CAGCTCGACC CCGCGCTGTT CTCGCCCAGG GCCGACTACC TGCTGCGCGT GCGCGGCATG AGCATGCGCG ACGCCGGCAT CCTCGACGGC GACCTCATCG CGGTGCATCG CAACAGCGAG GCGCGCAACG GCCAGATCGT GGTCGCCCGG GTGGACGACG ACGTCACCGT CAAGACCCTG CAACGCAAGG GCCCGGTGGT CGAGCTCCTC CCCGCCAACC CGGACTACAC CCCGATCGTC GTGGACACCC GCCGCGAGCC GCTGGTCATC GAAGGCGTCA TGGTGGGGCT GATCCGCAAG GACCACTGA
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Protein sequence | MTARSENLTA RQQEILDFIR STVESEGRPP TRAEVCTAFG FRSPNAAETH LRALAAKGAI LLEEGRARGI RLAEALGLPL VGRVAAGSPI LAAEHVEARY QLDPALFSPR ADYLLRVRGM SMRDAGILDG DLIAVHRNSE ARNGQIVVAR VDDDVTVKTL QRKGPVVELL PANPDYTPIV VDTRREPLVI EGVMVGLIRK DH
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