Gene Tmz1t_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2289 
Symbol 
ID7083721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2575603 
End bp2576061 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content69% 
IMG OID643699308 
ProductRibonuclease H 
Protein accessionYP_002355924 
Protein GI217970690 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.124048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAG TGGATATCTA TACCGACGGC GCCTGCAGCG GCAATCCCGG ACCCGGCGGC 
TGGGGCGCGA TCCTGCGCTC CGGATCGCAC GAGAAGGAGA TCTGGGGTGG CGAGCCGGCG
ACGACCAACA ACCGCATGGA GCTGCTCGCG GTGATCCGTG CCCTCGACGC GCTCAAGCGC
CCGGTGGCGG CGCGAGTTCA CACCGACAGC CAGTACGTGC AGAAGGGGAT CTCGGAGTGG
ATCCACGGCT GGAAGGCGCG GGGCTGGAAG ACGGCCTCGA AGGAGCCGGT CAAGAACGCC
GACCTGTGGC GGGCGCTCGA CGACGCGGCA TCGCGCCACC AGGTGAAGTG GTTGTGGGTG
CGCGGCCACA ATGGCCACCC CGAGAACGAA CGCGCCGACG CGCTCGCGCG CCGCGGCGTG
GACGCGGTGC GCAAGTCCGG CGCCGCGGTG CAATGCTGA
 
Protein sequence
MEEVDIYTDG ACSGNPGPGG WGAILRSGSH EKEIWGGEPA TTNNRMELLA VIRALDALKR 
PVAARVHTDS QYVQKGISEW IHGWKARGWK TASKEPVKNA DLWRALDDAA SRHQVKWLWV
RGHNGHPENE RADALARRGV DAVRKSGAAV QC