Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2259 |
Symbol | ompR |
ID | 7083691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2544444 |
End bp | 2545217 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643699278 |
Product | osmolarity response regulator |
Protein accession | YP_002355894 |
Protein GI | 217970660 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0634187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGA AAAACCGCTA TCGCATTCTC GTGGTGGATG ACGACGCGCG CCTGCGCGAG TTGCTGTCCC GATACCTTCA GGAACAAGGC TTTTCGGTGA AGGCCGTCGG CGATGCGCCG ATGATGGATC GCGCCCTGCA CCGCGAGCAT TACGACCTGA TCGTGCTCGA CCTGATGCTG CCCGGCGAGG ACGGGCTGTC GATCTGTCGC CGGCTGCGCG CGGCCGAGAA CCAGATCCCG GTCATCATGC TCACCGCCAA GGGTGACGAC GTGGATCGCA TCGTCGGGCT GGAGATGGGC GCCGACGACT ACGTCGCGAA GCCCTTCAAC CCGCGTGAGC TGGTGGCGCG TATCCAGGCG GTGATGCGTC GCCAGCCCCA CACCCTGCCG GGCGCGCCCA CCCCCGAGGA CGAGATCGTC GCGTTTGGCC GGGTCAAGGT GAACCTGGGC ACCCGCGTGC TTGTCCGCGA TGGCGAGGAG ATTCAGCTCA CCACCGGCGA ATTCTCGCTG CTCAAGGTGC TGCTAACCCA CCCGCGCCAG CCGCTGTCCC GCGACAAGTT GATGGAACTC GCGCGCGGGC GCGAGTACGG TGTGTTCGAC CGGGCGATCG ACGTCCAGGT CTCGCGCCTG CGCAAGCTGG TCGAGGACGA TCCCGCCAAG CCGCGCTACA TCCAGACCGT GTGGGGTTTC GGCTACGTCT TCGTGCCCGA TGAGCAAAAG GGCGGCGAGG ACAACGGCGG GCAGCCGGAC ACCCCGGCCG GCGGCGAGGA CTGA
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Protein sequence | MNQKNRYRIL VVDDDARLRE LLSRYLQEQG FSVKAVGDAP MMDRALHREH YDLIVLDLML PGEDGLSICR RLRAAENQIP VIMLTAKGDD VDRIVGLEMG ADDYVAKPFN PRELVARIQA VMRRQPHTLP GAPTPEDEIV AFGRVKVNLG TRVLVRDGEE IQLTTGEFSL LKVLLTHPRQ PLSRDKLMEL ARGREYGVFD RAIDVQVSRL RKLVEDDPAK PRYIQTVWGF GYVFVPDEQK GGEDNGGQPD TPAGGED
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