Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2250 |
Symbol | |
ID | 7083682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2535616 |
End bp | 2537082 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643699269 |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_002355885 |
Protein GI | 217970651 |
COG category | [C] Energy production and conversion |
COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0169608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTTC AACTCGAAAC CGCCACAGTC GCCAGCGATA CCTTGCGCCG TATCGCAATC GACCCCGTCT CGCGCGTGGA AGGCCACGGC AAGGTCACCA TCCTGCTCGA CGAGGACAAC AAGGTGCACC AGGTGCGCCT GCACATCGTG GAGTTCCGCG GCTTCGAGCG CTTCATCCAG GGGCGGCCGT ACTGGGAAGT GCCGGTGATG GTGCAGCGCC TGTGCGGCAT CTGCCCGGTG TCGCACCACC TCGCCGCGAG CAAGGCGCTC GACCTCGTCG TCGGCGCCGC ACGCGTCACG CCAACCGCCG ACAAGATGCG CCGCCTGATG CACTACGGCC AGATCCTGCA GTCGCACGCG CTGCACTTCT TCCACCTGTC CTCGCCCGAC CTGCTGTTCG GCTTCGGCTC CGAGCTCGGT CGGCGCAACA TCGTCGGCGT GGCACAGCAA TATCCCGACA TCGCGAAGAA AGGCATCCTG CTGCGCAAGT TCGGCCAGGA GGTGATCCGC CTCACCGCCG GCAAGCGCGT GCATGGCACC GGCGCGGTAC CGGGGGGCGT CAATCGCGCG CTGAGCGCCG ACGAACGCAA GCTCCTGCTC GCCGATGCCT ACCAGATGAT CGCCTGGAGC CGCGACGCGG TGCGCATCAT CAAGGAACTC CACCAGCAGG ACCGCGCGCT CTACGACCAC TTCGGCACCG TGCGCTCGAG CTTCATGGGC CTGGTCGCGC CCGACGGCAG CCTCGACCTC TACCACGGCG TGCTGCGCGC CAGGGACGCC GACGGCAGGA TCCTCTTCGA CCAGGTGGAC TACCAGACTT ACGACCGCCT CATCACCGAG GAGGTCAAGC CCTGGAGCTA CATGAAGTTT CCCTACTTCA CGTCGATGGG CCCGGAGGCG GGCTGGTACA AGGTCGGCCC GCTCGCGCGC GTGCAGAACT GCGACAGCAT CCCCACGCCG TTTGCCGAGC ACGAGCGCCG CGAACTCGTC GCGTACGCCG GCGGCAAGCC GCTGCACGGC AGCCTGGCCT TCCACTGGGC GCGCATGATC GAGATGCTCT TCGCCGCCGA GACCATCAAG GACCTGCTTC ACGACGACGA CCTCTCCGGC ACCGAGCTCA TGACGAGCGG CGAGCGCCGG CGCGAGGGTG TGGGCGTGAT CGAGGCCCCG CGCGGCACCC TCTTCCACCA CTACCAGGTG GGCGACGACG ACCTCGTCAC CATGGCCAAC CTGATCGTCT CCACCACCAA CAACAACCAG GCGATGAACA CGGCGGTGCG CGAGGTCGCG AAGCAATACC TCCACGGCCA GGAGATCACC GAGGGACTGC TCAACCACAT CGAGGTCGCC ATCCGCGCCT TCGACCCCTG CCTGTCCTGC GCCACCCACG CGCTCGGGCA GATGCCGCTG GAGGTCACGC TGGTGGATGC CGAGGGCACG GAGCTGGACC GGAAATACAA GGCATGA
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Protein sequence | MSFQLETATV ASDTLRRIAI DPVSRVEGHG KVTILLDEDN KVHQVRLHIV EFRGFERFIQ GRPYWEVPVM VQRLCGICPV SHHLAASKAL DLVVGAARVT PTADKMRRLM HYGQILQSHA LHFFHLSSPD LLFGFGSELG RRNIVGVAQQ YPDIAKKGIL LRKFGQEVIR LTAGKRVHGT GAVPGGVNRA LSADERKLLL ADAYQMIAWS RDAVRIIKEL HQQDRALYDH FGTVRSSFMG LVAPDGSLDL YHGVLRARDA DGRILFDQVD YQTYDRLITE EVKPWSYMKF PYFTSMGPEA GWYKVGPLAR VQNCDSIPTP FAEHERRELV AYAGGKPLHG SLAFHWARMI EMLFAAETIK DLLHDDDLSG TELMTSGERR REGVGVIEAP RGTLFHHYQV GDDDLVTMAN LIVSTTNNNQ AMNTAVREVA KQYLHGQEIT EGLLNHIEVA IRAFDPCLSC ATHALGQMPL EVTLVDAEGT ELDRKYKA
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