Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2228 |
Symbol | |
ID | 7083660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2509431 |
End bp | 2512061 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643699248 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_002355864 |
Protein GI | 217970630 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.229037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCATA ACCTGAGTGA AGCCTTCGCA TTTGGCAAGC TGGACCGTTC CGAGGACGCT ATCAAATGGC ATCCTCTGGT CGATCATTTA GCGGACGTCG CGGCCGTTTT TGAGGCGCTG TGCGCATGCC GAGCCATCCG CCGATCCATC GAGGCAGTTG CTGGGCGTAG CCTCGACCAT CGTGACTTCG CGCGGCTTGC TGCCCTCGCC TTTCTTCATG ACCTTGGCAA AGCGAACGCG GGGTTCCAGG CAAAGCGCTG GCTAAACGAG GAACGGCCGC GCGGCAGGCT GACCGCCGGG CACAGCGCGG AGGCAATCGC GCTGCTCGAA GCAAGTAATC ACAGCGACGA AGCCGAGGCG CTGCTACTGC ACCTGCCTAT TCTTGAAATC TGCGGCTGGG GGAAGCCTGA GACCCTGGAC AACTTGCTAC GCGCCAGCAT TGCGCACCAT GGACGGCCGA TCGCCAACGC ACCCGACTGG TTCAACGCCA GGATCCATTG GTCCAGGCAA GGTGAGTATG ACCCCGCCGA ACAACTAAAG AGCATTGGCG CCGCCCTCCA ACGCTTCGTT CCAGAGGCAT TCGTCGAAGG GGGCCTGCCA CTTCCCGATA CGCCGCGCTT CGCGCATTAC TTCGCCGGCC TCGTCCAATT GGCCGACTGG TTGGGTTCGG ACACTCGATT TTTCCCCTTC ACGAATGTGG GCGATCGAGA TCGCATCGGC AATAGCCGTG AACTGGCATC GACAGCGGTG CGCGAGATCG GCCTCGATCC TGAGCCTTGC CGTAAGCGGT TCGAGCAGGC ATCACCAGAT TTCGGCGACG TATTCGATAC GACCACTCCC TATCCCGCCC AGTCCGCAAT GTCCGACCCG GCGCTTGGTC AGGTTGTCGT GCTCGAAGCC GAGACTGGCA GCGGCAAGAC CGAAGCCGCG CTGTGGCGCT ACCTTCATCT GTTCGCGCGT GGCGCAGTCG ACGGGCTTTA CTTTGCCCTA CCGACCCGCG TGGCCGCATC ACAGGCCTAC CGGCGCGTGC GCGAGGCGCT TTCGCGCGCT TGGCCCGAGG GCGCTCCGCT CGCGGTTCGG GCATTGGCCG GTTATGCCGC CGCGGATGGG GAAACAGCTC GGGCGCTGCC CGATTTCAAG GTGTTGTGGA GCGACGATCC GTCCGATGCC GAAGCGGGTC GGCGATGGGC GGGCGAGAGT TCGAAGCGCT TCCTCGCCGC ACCGGTTGCC GTCGGCACGG TCGACCAGGC ACTGCTCGGC ACGCTGCAGG TAAAGCATGC TCACTTGCGC CATGCGCTGA CGGCGCGTTC GCTGCTTGTC ATCGACGAAG TGCACGCATC GGACGCTTAC ATGGCCGTGT TGATCGAACA GCTCATCAAC GCACAAATTG CGCTCGGCGG CCATACGCTA CTGTTGTCCG CGACACTCGG CGCAGCGGCC CGGACTCGCT ACCTCGCTGC CGGCAACCGC AAGGCGCAGC ATCTGCCGTC ACTCGCCCAA GCGAGCGGCC TACCCTACCC TGCCATAAGC GATGCTTGGG GCATTCGTTC CACAAGCGGC GCACCGCGAG AGAAGCGGGT CGCCTGGCAG TGTGAGGACG CCATCGATGA CCCGCAGCGC GTCGCCGCCC TTGCGCTCGA AGCCGCCGAA CAGGGCGCCC GCGTGCTGGT GATCCGAAAC ACCGTGCCGG CAGCCGTCGC CACCCTTGCA GCGCTCGAAG CGGCCACACC CAACGTAACC TGGCTCTTCA ATCGTGACGG CGTCATCACG CTGCATCACA GCCGCTTCTC GCGCGAAGAC CGGCTCATGC TCGACGCGAC GGTCGAAGCC CAACTCGGCA AAGGACGCTC CAGCGGACCG CTGATCGTGG TCGGCACCCA GACGCTGGAG CAAAGCCTGG ATCTCGACGC CGACTTCCTG ATCACCGACC TGTGCCCGAT GGACGTGCTG TTGCAGCGCA TCGGCCGATT ACATCGCCAT ATGCGCCCCG TCGAGGCTCG ACCCAACGCG TTCAGGGAGG CGCGTGTGCT TGTGCTGACG CCCGAAGGGG GCGACCTCAC ACCGTGCCTT ACCCGCCCGC GGCACGGACT CGGCCGCTTT CACGACGGCG GCGGCGTGTA TGCCGACACC CGCATCCTCG AAGCTACGCG CAAGCTGATT CACTCCGAAT CTCAGGTCCG CATCCCGGCC GACAACCGGC GACTGGTCGA GTCCGCCACG CACCCGGAGG CGCTGCACGC CATCGAATCG CTGGACACAG CTTGGGCGAC ACATGGTCAG CAGATTGACG GCGACACGGG TGCCCGCCGC ACCAGCGCCA AGCTGGGACT CCTGCCCCTC GACACCGCAT TCGTCGAACT TGGCTTCCCC GACGAAGTAA AGCTCGCAAC ACGCCTCGGC GCTGCTGACC GTCTGCTCAC TTTCGATTCG CCCCTCCAAG GGCCTTTTGG CCGGACGGTG CGGGAGCTTC CAATTAGGCA CCACTTGCTG CCGCGCGCCC TCCCACTTGA AGCGTTACCC GACGAGATCG TCGTCGAGCA TGGCGGCTTT AGGTTCCGCC TGGCCGACAC GCACTATCGC TACAGCCGCA TCGGCCTTGA AAAACTTCCG CAAACTGCCG CCTCGGAGTA A
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Protein sequence | MRHNLSEAFA FGKLDRSEDA IKWHPLVDHL ADVAAVFEAL CACRAIRRSI EAVAGRSLDH RDFARLAALA FLHDLGKANA GFQAKRWLNE ERPRGRLTAG HSAEAIALLE ASNHSDEAEA LLLHLPILEI CGWGKPETLD NLLRASIAHH GRPIANAPDW FNARIHWSRQ GEYDPAEQLK SIGAALQRFV PEAFVEGGLP LPDTPRFAHY FAGLVQLADW LGSDTRFFPF TNVGDRDRIG NSRELASTAV REIGLDPEPC RKRFEQASPD FGDVFDTTTP YPAQSAMSDP ALGQVVVLEA ETGSGKTEAA LWRYLHLFAR GAVDGLYFAL PTRVAASQAY RRVREALSRA WPEGAPLAVR ALAGYAAADG ETARALPDFK VLWSDDPSDA EAGRRWAGES SKRFLAAPVA VGTVDQALLG TLQVKHAHLR HALTARSLLV IDEVHASDAY MAVLIEQLIN AQIALGGHTL LLSATLGAAA RTRYLAAGNR KAQHLPSLAQ ASGLPYPAIS DAWGIRSTSG APREKRVAWQ CEDAIDDPQR VAALALEAAE QGARVLVIRN TVPAAVATLA ALEAATPNVT WLFNRDGVIT LHHSRFSRED RLMLDATVEA QLGKGRSSGP LIVVGTQTLE QSLDLDADFL ITDLCPMDVL LQRIGRLHRH MRPVEARPNA FREARVLVLT PEGGDLTPCL TRPRHGLGRF HDGGGVYADT RILEATRKLI HSESQVRIPA DNRRLVESAT HPEALHAIES LDTAWATHGQ QIDGDTGARR TSAKLGLLPL DTAFVELGFP DEVKLATRLG AADRLLTFDS PLQGPFGRTV RELPIRHHLL PRALPLEALP DEIVVEHGGF RFRLADTHYR YSRIGLEKLP QTAASE
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