Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2190 |
Symbol | |
ID | 7085543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 2469293 |
End bp | 2471374 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643699210 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_002355826 |
Protein GI | 217970592 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0728062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCTGT TCGCCGAAGA CGGCCGCGGC GAGACCGCGG CCGACGCCGC CGCACGCGCA GCGGCCCTGC GCGCCGAGAT CGCGCGTCAC GACCATGCCT ATTACGTGCT CGACGCGCCG ACGATTCCCG ACGCCGAGTA CGATCGCCTG TTCCGCGAGC TGCAGGCCAT CGAGCGGGCG TACCCGGCGC TGCGCAGTGC CGACTCGCCG ACACAGCGGG TGGGCGGCAA GGCGCTCGCG CAGTTCGCCA CGGTGCGCCA CCGCGTGCCC ATGCTGTCGA TCTCCACCGA GACCGACACC GAGGCGAGCG GGGCATTCGC GTTCGATGCG CGCGTGCGCC GCGCGCTCGG CCTCGACGAG GACGATGCGG CGGTGGCCTA CGCCGCCGAG CTCAAGTTCG ACGGCCTCGC GATCAGCCTG CGCTACGAGG ACGGCGTGCT CGTGCAGGCC GCTACCCGCG GCGACGGCGA GACCGGGGAG GACGTCACGA GCAACGTGCG CACGGTGAAG GCGATCCCGC TGCGCCTGCT CGGCGAGGCG CCGCCGGTGC TGGAGGTGCG CGGCGAGATC TACCTGCGCC GCGATGACTT CGAGCGCCTC AACGCGCGCC AGGCGGAGGC CGGCGAGAAG ATCTTCGTCA ATCCGCGCAA CGCCGCCGCC GGCAGCATCC GCCAGCTCGA CCCCGGCATC GCCGCGCGCC GGCCCTTGTC CTTCTACGCC TACGGGCTGG GCGAGGTCGC CGGTTGGACG CTGCCCGCGA CCCAGACCGA GGTGCTGGAC GCGCTCGCCG CCTTCGGCCT GCCGGTGTGC GGCCACCGCG CGCAGGTGCG CGGCGCAGAG GGGCTGGCGG CCTTCCACGC ACGCATCGGC GCACTGCGCG ACACGCTGCC CTTCGACATC GACGGCGTCG TCTACAAGGT CGACGCGCTC GCGCTGCAGC AGCAGCTCGG CTTCGTCACC CGCGAGCCGC GCTGGGCGGT GGCGCACAAG TACCCTGCTC AGGAGGCGGT GACGCTGCTG CGCGACATCG AGGTGCAGGT CGGCCGCACC GGCGCGCTGA CCCCGGTGGC GCGCCTCGAG CCGGTCTTCG TCGGCGGCGT CACGGTCACC AACGCCACGC TGCACAACCA GGACGAGATC GACCGCAAGG ACGTGCGCAT CGGCGACTGG GTGATCGTGC GTCGTGCAGG CGACGTGATC CCCGAGGTGG TGGCGCCGAT CCTGGAGCGC CGCGGCGGCG AACTGCCGCG CTTCGTGCTG CTCGACCGGT TCCCCACCTG TCCGGTGTGC GGTTCGCATG TGGTGCGCGG CGAAGACGAA GCGGTCGCGC GCTGCACCGG CGGGTTGTTC TGCCCGGCCC AGCGCAAGCA GGCGCTGCTT CACTTCGCCG GCCGGCGTGC GATGGACATC GAAGGATTGG GCGACAAGCT GGTCGATCAG CTTGTGGACG CGGCGATCGT GAAGACGCCG GTCGATCTCT ACCGCCTCGG CGTGCTCGCG CTCGCCAACC TCGAGCGCAT GGGCGAGAAG TCGGCGCAGA ATCTGCTGAT GGCGATCGAG AAGAGCCGTG GCACCACGCT GGCGCGCTTC ATCTTCGCGC TCGGCATCCG CAACGTCGGC GAGGCCACCG CGCGCGACCT CGCACGCCAC TTCGGCAAGC TCGACGCGCT GATCGCGGCC GACGTCGATG CCCTGCAGCA GGTGCCCGAC GTGGGGCCCA TCGTGGCGAA ATGCATCGCC GAGTTCTTCG CCGAGCCGCA CAATCGCGAG GTGATCGAGC AGTTGCGTGC CGCCGGCGTG CATTGGGCCG AGGGCGAGCC GCAGGGCTCG GTGGCCGGCG CACTCGCGGG CAAGACCTTC GTGCTCACCG GCACGCTGCC GACCCTGAGC CGCGACGAGG CCAAGGCGCG GATCGAGGCC CGCGGCGGCA AGGTCGCCGG CTCGGTGTCG AAGAAGACGC ACTACGTGGT CGCCGGCGCC GAGGCGGGCT CCAAGCTCGA CAAGGCGCAG GCGCTCGGGC TCGCCATCCT CGACGAGGAC GGGCTGCGCG TGCTGCTGAA CGAAACGGAT ACAAACGCTT GA
|
Protein sequence | MDLFAEDGRG ETAADAAARA AALRAEIARH DHAYYVLDAP TIPDAEYDRL FRELQAIERA YPALRSADSP TQRVGGKALA QFATVRHRVP MLSISTETDT EASGAFAFDA RVRRALGLDE DDAAVAYAAE LKFDGLAISL RYEDGVLVQA ATRGDGETGE DVTSNVRTVK AIPLRLLGEA PPVLEVRGEI YLRRDDFERL NARQAEAGEK IFVNPRNAAA GSIRQLDPGI AARRPLSFYA YGLGEVAGWT LPATQTEVLD ALAAFGLPVC GHRAQVRGAE GLAAFHARIG ALRDTLPFDI DGVVYKVDAL ALQQQLGFVT REPRWAVAHK YPAQEAVTLL RDIEVQVGRT GALTPVARLE PVFVGGVTVT NATLHNQDEI DRKDVRIGDW VIVRRAGDVI PEVVAPILER RGGELPRFVL LDRFPTCPVC GSHVVRGEDE AVARCTGGLF CPAQRKQALL HFAGRRAMDI EGLGDKLVDQ LVDAAIVKTP VDLYRLGVLA LANLERMGEK SAQNLLMAIE KSRGTTLARF IFALGIRNVG EATARDLARH FGKLDALIAA DVDALQQVPD VGPIVAKCIA EFFAEPHNRE VIEQLRAAGV HWAEGEPQGS VAGALAGKTF VLTGTLPTLS RDEAKARIEA RGGKVAGSVS KKTHYVVAGA EAGSKLDKAQ ALGLAILDED GLRVLLNETD TNA
|
| |