Gene Tmz1t_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2163 
Symbol 
ID7085516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2436886 
End bp2437719 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content73% 
IMG OID643699183 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_002355799 
Protein GI217970565 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.132475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGC CGCAGCTCAA GGCGCTGGCC TCGCGTGACA ACGCCTTCGT CAAGCGCCTG 
CATGCGCTCG CGCACTCGGC ACGCGACCGC CGCAAGCTCG ACGAGACCGT GCTCGACGGT
GCCCACCTGG TCGAATCCGC GCTCGCGGCG GGCGTGGCCT TGCGCGCGCT GGTGGTGTCG
GAGTCCGGCC TGCTGCGCGA GGAGCATCGT CGCCTGCTCG CGGCGGCGCC GGCAGAGGTG
CCGCGCTACC GCCTGGGCGA TGCCTTGTTC GCGCATGTCA GCCCGGTCGA CAGCCCCGCC
GGCTTGCTGG CCACCATCGC CATGCCGGCG AGCACGCCGA GCGCCCCGGG CGACGCCAGC
CTGATCGTGG TCGACGGCGT GCAGGACCCC GGCAACCTCG GCAGCCTGCT GCGCACCGCG
GCCGCGGCCG GCATCCGCCA CGCGCTGCTC GGTGAGGGCT GCGCGCAGGC CTGGTCGCCG
CGCGCGCTGC GTGCCGGCAT GGGCGCGCAG TTCGTTGTCC GGATCGAGGA GGGCTGCGAA
CTGCTCGCCC GACTGGAGAG CTACCCGGGT CTGTGCCTGG CAACTGCCCT GCGCGAGGAC
GCCCACCCGC TCTACGAGCT CGACCTGCGC GGCCCGGTGG CCTGGCTTTT CGGGGCGGAA
GGGCAGGGAC TTTCCCCGGC CCTGCTGGCG CGCGCCGACG GCTGCGTGAT CATCCCGATG
ACGGCCGGCA TCGAATCCCT CAACGTCGCC GCGGCCGCGG CGGTCTGTCT GTTCGAGCAG
GCGCGTCAGC TCCGCGCCAC GGGGACGATC CGAGGCGTGA ATTTTCCTTC TTGA
 
Protein sequence
MSEPQLKALA SRDNAFVKRL HALAHSARDR RKLDETVLDG AHLVESALAA GVALRALVVS 
ESGLLREEHR RLLAAAPAEV PRYRLGDALF AHVSPVDSPA GLLATIAMPA STPSAPGDAS
LIVVDGVQDP GNLGSLLRTA AAAGIRHALL GEGCAQAWSP RALRAGMGAQ FVVRIEEGCE
LLARLESYPG LCLATALRED AHPLYELDLR GPVAWLFGAE GQGLSPALLA RADGCVIIPM
TAGIESLNVA AAAAVCLFEQ ARQLRATGTI RGVNFPS