| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2042 |
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| Symbol | |
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| ID | 7083802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2306180 |
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| End bp | 2307823 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643699069 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002355686 |
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| Protein GI | 217970452 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0504248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCGC GCCGGCGCCC GTCGCCGCAC CCGCTTCGCG CACGGCCCGC CGCGGGCAGC
TTCTGTGCTA TACAGGACGA GTCCGACCGC CACGGAAACC ATGCGGCATG CGGGACCGCC
GCCACTGACC AGGTGAGCCC CATCGACGCG TCCAGACCGC ACCCACCGCC TCGTGCCGGG
CATGTGCTCG TGGTGGCGCT CGCCCTCGGC GCGGGCTCGG CGCAGGCCGC GGGGATCGAT
GCCGGCGGGC TGGCCTGGAA TGGCGGTCTG GTTCTGCTCG GCGGCGGGCT GGGTTATCTG
CTCGGCCGCC GCAGCCTGCG CCGACGCACC CTCGCCGGTG CGGCAGAGGG CTGCGCTGCG
GACGGCCCGC TTCACGACGA CGCCCCGGCG AGCGGCGGCG CGGTTTCGAG GCGGGAGTGG
GCAGGCACGC CTGCAGACGC CGACGATTGC GCGCCGGCGA GCGCGCTCCC CCATGCCCTC
CTCCCCGCCG CGCACGCCGC TCCGCCCGCG GGCGCAGGCG CGGCGATCGG GGTGATCGCG
ACCGAATCCT ATCGCGAGGT GGTCGATTCG CTCAGCGAGG TGCTCTTCCG CACCGACGAG
CTTGGCCGCC TGGTTTTTCT CAACGACGCC TGGAAGGATC TCTCCGGTTT CGATCTGGAC
GCCACGCGCC AGCATGCGCT GACCGATTTC CTCCATCCAG ACGACCGCTT GCGCGCACGC
GACGCAATCC GCGCCCTGCT GTGCGGAGAC GGCCAGGAAT GGACCGACGA GTTGCGGCTG
CGCACGCTCT CCGGCGAGAT CCGCTGGGTG GCGATCGACT GCCGTGCCTT GCGCGACGGC
AGCGGGCAGG AAAGCGGGAT CGCCGGCACC ATCGACGACA TCTCGGCGCG CAAGATCGCC
GAGTTCAGCC TGCGCAACCT GAACCAGGAG CTCGAGTCGC GGGTGCGCTC GCGCACCGCC
GAACTCGAGA CCGCGGTGCG CGAGCTCGAG GCCTTCTCGT ATTCCGTCTC GCACGACCTG
CGTGCGCCGC TGCGCGCCAT CGACGGCTTC GCGCGCATCC TCGTCGAGGA GGCCGGGCCG
CGGCTCGACG AACGCCAACG CGAGCAGCTC GTGCGCATCC GCGCCGGCGC CGAGCGCATG
GCGATCCTGA TCGATGCGCT GATCGACCTC GCCAGCGTCT CCCGGCAACC GTTGCGCAGG
AGGCCGGTCG ACCTGTCGCG CATCGCCGAT GCGGTGATCC GCGACCTGCA GGCGGAGTCG
CCCGGGCGCG TGGTCGCGGT CGAGATCACC AGCGACATGA CGGTGGTCGC CGACCCGGTG
CTGATGCACG TGCTGCTCGA CAACCTGCTG CGCAATGCAT GGAAGTTCAC AAGCCAGTGC
GAACATCCGC GTATCGTCTT CGGCGCGGAA CGCGACGGCG AGCGCACGGT GTTCCACGTC
GAGGACAACG GCGCCGGATT CGAGATGAAC TACGCGGGCA AGCTCTTCCA GCCCTTCCAG
CGCCTGCACG CGCAGCACGA GTTTCCCGGC ACCGGGATCG GGCTCGCCAC CGTACAACGC
ATCGTCGCCC GCCATGAGGG CCGGGTGTGG GCCAGCGCGG AACCGGGCAA GGGCGCGCGC
TTCTGCTTCA TGCTGGGGCA TTGA
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| Protein sequence | MRSRRRPSPH PLRARPAAGS FCAIQDESDR HGNHAACGTA ATDQVSPIDA SRPHPPPRAG
HVLVVALALG AGSAQAAGID AGGLAWNGGL VLLGGGLGYL LGRRSLRRRT LAGAAEGCAA
DGPLHDDAPA SGGAVSRREW AGTPADADDC APASALPHAL LPAAHAAPPA GAGAAIGVIA
TESYREVVDS LSEVLFRTDE LGRLVFLNDA WKDLSGFDLD ATRQHALTDF LHPDDRLRAR
DAIRALLCGD GQEWTDELRL RTLSGEIRWV AIDCRALRDG SGQESGIAGT IDDISARKIA
EFSLRNLNQE LESRVRSRTA ELETAVRELE AFSYSVSHDL RAPLRAIDGF ARILVEEAGP
RLDERQREQL VRIRAGAERM AILIDALIDL ASVSRQPLRR RPVDLSRIAD AVIRDLQAES
PGRVVAVEIT SDMTVVADPV LMHVLLDNLL RNAWKFTSQC EHPRIVFGAE RDGERTVFHV
EDNGAGFEMN YAGKLFQPFQ RLHAQHEFPG TGIGLATVQR IVARHEGRVW ASAEPGKGAR
FCFMLGH
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