Gene Tmz1t_1780 details

Gene Information

• Locus tag: Tmz1t_1780
• Symbol: lspA
• ID: 7085750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 2001317
• End bp: 2001853
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643698802
• Product: lipoprotein signal peptidase
• Protein accession: YP_002355428
• Protein GI: 217970194
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.316682
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACAC CTCACCCGAC GCCGCACGCG CGCAGTGCGC TGTCTCTGAT GCTGCCCTGG 
CTGATCCTCG CCGTGGTGGT CGGCGTGCTC GACCAGGTCA CCAAGCAGAT GGTGATGGCG 
AATCTGCGCC TCGGCGAGCT GGTTCCGATC ACAGGCTTCT TCGATCTGGT GCTGGTGTTC 
AACACCGGCG CCGCGTTCAG CTTTCTCGCC GACCACAGCG GCTGGCAACG CTGGTTTTTC 
ACCATACTGG CCTTCGGCAT CAGCGCCTGG CTGCTGACGC TGATGCACCA CCATCGCCAC 
GAAAAGCTGC TGCCGACCGC CTTCGCCCTG ATCATCGGCG GTGCGCTCGG CAACGTCTAT 
GACCGCCTCG TGCATGGCGC GGTGGTCGAC TTCCTGCACT TCCACTACGC CGGCTGGAGC 
TGGCCGGCGT TCAACCTGGC CGACTCGGCC ATCACCGTGG GTGTCGCGAT GATGCTCTGG 
GGCCAGTTCT TTGGCCCCAA AGCCGGCGAC CCGCCCCGAC CGGGAGCACC ATCTTGA 

 

Protein sequence

MTTPHPTPHA RSALSLMLPW LILAVVVGVL DQVTKQMVMA NLRLGELVPI TGFFDLVLVF 
NTGAAFSFLA DHSGWQRWFF TILAFGISAW LLTLMHHHRH EKLLPTAFAL IIGGALGNVY 
DRLVHGAVVD FLHFHYAGWS WPAFNLADSA ITVGVAMMLW GQFFGPKAGD PPRPGAPS