Gene Tmz1t_1688 details

Gene Information

• Locus tag: Tmz1t_1688
• ID: 7084108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 1894735
• End bp: 1895337
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643698709
• Product: chromosome segregation and condensation protein, ScpB
• Protein accession: YP_002355339
• Protein GI: 217970105
• COG category: [K] Transcription
• COG ID: [COG1386] Predicted transcriptional regulator containing the HTH domain
• TIGRFAM ID: [TIGR00281] segregation and condensation protein B

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.145161
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACCCG CAACGACGCC TGAGACCTGG TTGCGCATCG TCGAGGCGGC GCTGCTCTCC 
GCGCCGGGGG CACTGCCGGT GTCGGAGCTG CGCAAGCTCT TCGACGAGGA TCCGGGGCCG 
GACCTGGTGC GCCGCCTGCT CGACGAGCTG CGCGCGCAGT GGTTCGAGGC CGGGCGCGGG 
GTCGAGCTGG TGCAGTTGGC GAGCGGCTGG CGCTTCCAGA CACGGCCCGA GTATCAGGTC 
TACCTCGACC GCCTGAAGGA AGAAAAACCG CCGCGCTACT CGCGCGCGGT CATGGAAACG 
CTGGCGATCA TCGCCTATCG CCAGCCCGTC ACGCGCGGTG ACATCGAGGA CATCCGCGGC 
GTGGCGGTCT CGCCCAGCGT CTTGAAAACC CTCGAATCGC GCGGCTGGGT CGACATCGTC 
GGCCACCGCG ACACGCCCGG GCGGCCGGCG CTCTTCGCCA CCACCCGGCG CTTCCTCGAC 
GAGATGGGGC TGCGCAGCCT GACCGAGCTG CCGGCGCTCA CCGAACTCGA AAAAATCATG 
GATCTAGTCG ATGTCTCGCA AACCGAACCG GCCGCTGCGC CCGCCCCTGA AGAAGAAGTC 
TGA 

 

Protein sequence

MAPATTPETW LRIVEAALLS APGALPVSEL RKLFDEDPGP DLVRRLLDEL RAQWFEAGRG 
VELVQLASGW RFQTRPEYQV YLDRLKEEKP PRYSRAVMET LAIIAYRQPV TRGDIEDIRG 
VAVSPSVLKT LESRGWVDIV GHRDTPGRPA LFATTRRFLD EMGLRSLTEL PALTELEKIM 
DLVDVSQTEP AAAPAPEEEV