Gene Tmz1t_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1621 
Symbol 
ID7084831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1815565 
End bp1816779 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID643698641 
Productprotein of unknown function DUF214 
Protein accessionYP_002355272 
Protein GI217970038 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTCA GACTGGCCCT GCGCAACCTG CTGCGGCAGA AGGTCCGCAG CGCGATGACG 
CTTGCCGCGA TCGTGTTCGG CGTGGCGGGC CTGATCGTGT CGGGCGGATT CATCCAGGAC
ATCTTCCTCC AACTCGGCGA GGCGATCATC CATTCGCAAA CCGGCCACGT GCAGGTCTTC
CGCCAGGGCT TCATCGAACG CGGCACGCGC CAGCCCGAAC GATTCCTGAT CGAACGCCCG
CGCGAAACCG CAACGAGAAT CGAGGCCCTC CCCGAGGTCG ACGAGGTCGC GCTGCGCCTG
AGCTTCGCCG GGCTGCTGAA CAACGGCAAG CGCGACCTCG GCATCGTCGG CGAGGGCATC
GAGCCCGGCA AGGAGGCACG ACTCGGCAGT TTCCTCCAGA TCCTGTCGGG CCGCGCGCTA
CGCGAGGACG ACGTGTTCGC GATGGTCGTC GGCCAGGGCG TCGCCCACTC GCTGAGCCTC
GCGGTGGGCG ATCGGGTGAA CCTCGTCCTG AGCACGGCCG AGGGCGCGAT GAACATGCTC
GACTTCGAGA TCGTCGGCAT CTTCCAGAGC TTCTCCAAGG AGTTCGACGC GCGCGCGCTC
CGCATACCGC TCGGCGCGGC GCAGGAGTTG CTCTTCACCG ACGGCGCCAA TCTGCTGGTC
GCGACCCTTC ACCGCACCGA GGACACCGAC CTCGCCCACG CCCGCATCGC GCAGGCGGTC
GCCGGCAGCG AGCTCGAGGC CCGGCACTGG CGCATGCTTT CGGATTTCTA CGAAAAGACG
CTGGCCTTGT ACGAACGCCA GTTCGGCGTG CTGCAGGCCA TCATCCTGGT GATGGTGCTG
CTGTCGGTCG CGAACAGCGT CAATATGACA GCCTTCGAGC GCCTGTCCGA ATTCGGCACC
CTGCTGGCGC TCGGCAACCG GAATGCCAGC ATCTTTCGTC TGATCCTGAT CGAGAACATC
CTCCTCGGAT TGATTGGCGC CGCCCTCGGC ACGCTGATCG CGCTGGGCAT CGCACTTGCG
GTGTCCGCCG TCGGCATCCC GATGCCGCCG CCGCCCAACT CGAACGTGGG CTACACCGCC
ATGATCCGGA TCGTACCGGC GACAATCGCC TCCGCGTTCA TGATCGGCCT CCTCGCCACC
GCGCTCGCAG CCTTGCTTCC GGCACGGCGG ATCTCCCGCA TTCCGGTCGT CAGCCTGCTC
CGTAACGGAA ATTGA
 
Protein sequence
MIVRLALRNL LRQKVRSAMT LAAIVFGVAG LIVSGGFIQD IFLQLGEAII HSQTGHVQVF 
RQGFIERGTR QPERFLIERP RETATRIEAL PEVDEVALRL SFAGLLNNGK RDLGIVGEGI
EPGKEARLGS FLQILSGRAL REDDVFAMVV GQGVAHSLSL AVGDRVNLVL STAEGAMNML
DFEIVGIFQS FSKEFDARAL RIPLGAAQEL LFTDGANLLV ATLHRTEDTD LAHARIAQAV
AGSELEARHW RMLSDFYEKT LALYERQFGV LQAIILVMVL LSVANSVNMT AFERLSEFGT
LLALGNRNAS IFRLILIENI LLGLIGAALG TLIALGIALA VSAVGIPMPP PPNSNVGYTA
MIRIVPATIA SAFMIGLLAT ALAALLPARR ISRIPVVSLL RNGN