Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1605 |
Symbol | |
ID | 7084815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1799913 |
End bp | 1801847 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643698625 |
Product | ABC transporter related |
Protein accession | YP_002355256 |
Protein GI | 217970022 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0890354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCTCC TCGCCGTAGA TAACGCCTGC CTCGCCTTCG GTCACGTCGA CCTGCTCGAT CACGTGAGCT TCCAGCTCGA CGCCGGGGAG CGCGTGGCGC TCATCGGGCG CAACGGCTCG GGCAAGTCCA GCCTCCTGCG CGCGCTCGCC GGCCAGGCAG CGCTCGATGA TGGCACAGTG TGGCGGCAGG CTGAAATGGT CGCGGCATAC GTGCCGCAGG AGCCGGATTT CGAGCTCGGG CGCGACGTCT TCGAGACCAT CGCCGACGGC CTGGGCGCCG CCGCCCGCCT GCTCGTCGAC TACCATGCTG CCATGCTGGA GGTCGCCGAG CACGCCAGCC CCGAGGCCAT GGCCCGGCTG GACGCCCTGC AGCATGCGGT CGAGGCCGCG GGCGGCTGGC GGCTCAACCA GCGCGTCGAG CAGGTGGTCG CCCGACTCGG ACTCGACCCG GCGGCAAAGG TTTCCAGCCT CTCCGGCGGC GGCGTCAAGC GTGTGGCGCT GGCGCGCGCG CTGGTCGCCG AGCCCGACCT GCTGCTGCTC GACGAACCCA CCAACCACCT CGACCTCGAC GGCATCCTGT GGCTCGAAGG GCTGATCCGC GACTTCCGCG GTGCCGTCAT CGTCATCACC CACGACCGCG TCTTCCTCGA CAACGTCGCC ACCCGCATCA TCGAGCTCGA CCGCGGCCGG CTGGCGAGCT ACCCGGGGCG CTTCTCCGAC TACCAGCGCC GCAAGGCGGA AGAGCTCGAA GCCGAGGAGA AGGCCGCCGC GCGCTTCGAC AAGTTCCTCG CCCAGGAGGA GGTGTGGATC CGCAAGGGCG TGGAGGCCCG GCGCACCCGC AACGAAGGCC GCGTGCGTCG GCTCGAGGCC CTGCGCAACG CGCGCGCCGC GCGTCGCGAC CGCCTCGGCG ACGTCAGCCT GGCGGTCGAC ACCGGCGACA AGAGCGGCCA GATGGTCGCG GAGCTCACCG ACGTCTCCAA GCGCTACGGC GACAAGGTGG TGGTGCGCGA TTTCTCCACC CGCATCCTGC GCGGCGATCG CATCGGCTTC ATCGGCCCCA ACGGCGCCGG CAAGACCACG CTGTTGAAGC TCATCCTCGG CGAGGTCGAG CCCGACGCGG GCACGGTGCG CCGCGGCACC CGGCAGACGG TGGCCTATTT CGACCAGCTG CGCGCCCAGC TCGACCCCGA GCTGCCGCTC ACCGAGGTCA TCAGCCCGGG CTCGGATTTC GTCGAGATCG GCGGCGAGAA GAAGCACGTC ATCGGCTACC TCGGCGACTT CCTGTTCGCG CCGCAGCGCG CGCGCTCACC GGTCAAGTCG CTCTCCGGCG GCGAGCGCAA CCGCCTGCTG CTGGCGCGTC TGTTCGCCCG CCCGGCCAAC GTGCTGGTGC TCGACGAGCC CACCAACGAC CTCGACATCG AGACCCTCGA CCTGCTGGAG GAGCTGCTTG CCGGCTACGA CGGCACGCTC TTCCTCGTCA GCCACGACCG CGCCTTCCTC GACAACGTGG TCACCCAGGT GATCGCCGCC GAGGGCGACG GGCGTTGGAG CGAATACGCC GGCGGCTACG GCGACTGGCA GCGCGTTCAG GCACGGCGTG CCGAGGAGGC TGCCGCGCGC GAGGCGACGG CGCGCGAGAG CGTCAGGCGC AGCGCTCCGC CCGCGGACAA GGCGCGCGCC GCCGAGCCCA AGGCCGCGAA CCGCCCGACC AAGCTGTCCT TCAACGAAAA GCGCGAGCTC GAGGCCTTGC CCGAGCGCAT CGCCGCGCTC GAGGACGAGC AGACCGCGTT GCACGCGCGC ATGGCCGACC CGGCGCTGTA CCAGAACGCC CCGCAGGAGG TCGCGCAGAT CAAGGCGCGG ATGGAGGCGC TGGACGGCGA GATCGAGACC GCGATGCTGC GCTGGGAAGA GCTCGAGTCG CGCGCGGCAG GTTGA
|
Protein sequence | MPLLAVDNAC LAFGHVDLLD HVSFQLDAGE RVALIGRNGS GKSSLLRALA GQAALDDGTV WRQAEMVAAY VPQEPDFELG RDVFETIADG LGAAARLLVD YHAAMLEVAE HASPEAMARL DALQHAVEAA GGWRLNQRVE QVVARLGLDP AAKVSSLSGG GVKRVALARA LVAEPDLLLL DEPTNHLDLD GILWLEGLIR DFRGAVIVIT HDRVFLDNVA TRIIELDRGR LASYPGRFSD YQRRKAEELE AEEKAAARFD KFLAQEEVWI RKGVEARRTR NEGRVRRLEA LRNARAARRD RLGDVSLAVD TGDKSGQMVA ELTDVSKRYG DKVVVRDFST RILRGDRIGF IGPNGAGKTT LLKLILGEVE PDAGTVRRGT RQTVAYFDQL RAQLDPELPL TEVISPGSDF VEIGGEKKHV IGYLGDFLFA PQRARSPVKS LSGGERNRLL LARLFARPAN VLVLDEPTND LDIETLDLLE ELLAGYDGTL FLVSHDRAFL DNVVTQVIAA EGDGRWSEYA GGYGDWQRVQ ARRAEEAAAR EATARESVRR SAPPADKARA AEPKAANRPT KLSFNEKREL EALPERIAAL EDEQTALHAR MADPALYQNA PQEVAQIKAR MEALDGEIET AMLRWEELES RAAG
|
| |