| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1557 |
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| Symbol | |
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| ID | 7083639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1733172 |
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| End bp | 1734815 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698574 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002355211 |
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| Protein GI | 217969977 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0962171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGT TCGTCGTCGC CAACATGGCG CCGCTGATGT TCGCGTCCAT GATCCTCTTC
CTGCTGTTCG GCTTTCCGGT GGCGTTTGCG CTCGCGGCCA ACGGCATCCT GTTCGGCCTC
GTCGGCATCG AGCTCGGCCT GCTCCACGGT GCGCTGTTCC AGGCGCTGCC GGAGCGCATC
TTCGGCATCA TGGCCAACGA CACCCTGCTC GCGGTGCCTT TCTTCACCTT CATGGGGCTG
ATCCTCGAGC GCAGCGGCAT GGCCGAGGAT CTGCTCGACA CCATCGGTCA GTTGTTCGGG
CCGATCCGCG GCGGCCTCGC CTTCGCGGTG ATTTTCGTCG GCGCGCTGCT CGCGGCGACC
ACCGGCGTGG TCGCGGCCTC GGTGATCTCG ATGGGTCTGA TCTCGCTGCC GATCATGATG
CGCTACGGCT ACGACCATCG CCTCGCCACC GGCGTGATCG CCGCCTCCGG GACGCTGGCG
CAGATCATCC CGCCCTCGCT GGTGCTGATC GTGATGGCCG ACCAGCTCGG CCGCAGCGTC
GGCGACATGT ATCAAGGCGC GCTGGTCCCG GGCTTGGTCC TCACCGGCCT GTATGTGGTC
TATGTCGCGG TGGTGGCGAT CTTCCGGCCG TCGCTCGCGC CGGCGATGCC GCCCGAGGCG
CGGACGCTGC GCGAGCCCGA TGGCGCCAGC GGGTTGCGCT CGCTGGCCCT GCTGACCGTG
GTCGCGGGCG CCGGCGCCTG GCTCTTCGCC AGCCAGATCT ATCGCGCCGA TGCACCGCGC
GACGAGGTGG TGGTGGTGTC GGCGATGGCC GGGATCGGCA TCGCGTTCGT GGCAGCGATG
GTCAACCGCA TCTTCGGCAT CGGCCTGCTG TCGCGCATGG CCGAGCGCGT GACCTTCGTG
CTGATCCCGC CGCTCGGGCT GATCTTCCTC GTCCTCGGCA CCATCTTCAT CGGCGTCGCG
ACGCCGACCG AGGGCGGTGC GATGGGGGCC CTCGGCGCGG TGCTGATGGC GCTCGCGCGC
CGGCGCCTGT CGCTGCCGCT GCTCAGGCAG GCGATGGACT CGACCACCAA GCTTTCGTGC
TTCGTGGTCT TCATCCTGAT CGGCTCCAGC GTGTTCGGCC TCACCTTCCG CGGTGTAAAC
GGCGACCTCT GGGTCGAGCA CCTGATGACC TCGCTGCCCG GCGGGCAGAC CGGCTTCCTG
GTCGCGGTGA ACCTGCTCGT ATTCGTGCTC GCCTTCTTCC TCGACTACTT CGAGCTCGCC
TTCATCATCG TGCCCCTGCT CGCGCCGGTG GCGGACAAGC TCGGCATCGA CCTGATCTGG
TTCGGCGTGC TGCTGGCGGT GAACATGCAG ACCTCCTTCC TGCATCCGCC CTTCGGCTTC
GCGCTCTTCT TCCTGCGCTC GGTGGCGTCG GAGAAGGTGA AGACGGCGTC GATCTACTGG
GGTGCGGTGC CCTTCGTGAT CATCCAGCTC GTCATGGTCG GCCTCATCAT TGCCTTCCCC
GGCCTGGTGT CCTACGGCGA CGCGGGCGCC AAGCCGGCGC AGCAGCAGGA ACTCGACCTC
GAGCAACTGC TGCAGGGCGG CGGCGGGGCC GCAGCGGCGG GCGATTCGAA CGCCGACCTG
ATGCGGCAAC TGCAGGGCGA CTGA
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| Protein sequence | MTEFVVANMA PLMFASMILF LLFGFPVAFA LAANGILFGL VGIELGLLHG ALFQALPERI
FGIMANDTLL AVPFFTFMGL ILERSGMAED LLDTIGQLFG PIRGGLAFAV IFVGALLAAT
TGVVAASVIS MGLISLPIMM RYGYDHRLAT GVIAASGTLA QIIPPSLVLI VMADQLGRSV
GDMYQGALVP GLVLTGLYVV YVAVVAIFRP SLAPAMPPEA RTLREPDGAS GLRSLALLTV
VAGAGAWLFA SQIYRADAPR DEVVVVSAMA GIGIAFVAAM VNRIFGIGLL SRMAERVTFV
LIPPLGLIFL VLGTIFIGVA TPTEGGAMGA LGAVLMALAR RRLSLPLLRQ AMDSTTKLSC
FVVFILIGSS VFGLTFRGVN GDLWVEHLMT SLPGGQTGFL VAVNLLVFVL AFFLDYFELA
FIIVPLLAPV ADKLGIDLIW FGVLLAVNMQ TSFLHPPFGF ALFFLRSVAS EKVKTASIYW
GAVPFVIIQL VMVGLIIAFP GLVSYGDAGA KPAQQQELDL EQLLQGGGGA AAAGDSNADL
MRQLQGD
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