Gene Tmz1t_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1514 
Symbol 
ID7083596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1692364 
End bp1693314 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content70% 
IMG OID643698531 
Producttranscriptional regulator, PaaX family 
Protein accessionYP_002355168 
Protein GI217969934 
COG category[K] Transcription 
COG ID[COG3327] Phenylacetic acid-responsive transcriptional repressor 
TIGRFAM ID[TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.139923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACTT CCATCCAAGA TCGCCTTGAA GCGTTCCGCA AGCAAGATCG CGTGCAGGCC 
GGGTCGCTGA TCATTTCCGT CTTCGGCGAC GCCGTGCTGC CCCGAGGCGG ACGCATCTGG
CTGGGCAGCC TGATCCGCTT GCTCGAGCCG CTTGGGCTCA ACGAGCGTCT CGTCCGCACA
TCGGTGTTTC GGCTTGCGCG CGATGAATGG CTGGTCAGCG AGCCTTGCGG CCGCCGTACG
GACTATATGC TGACGCCTTC CGGTCTGCAG CGTATCGAGG AGGCGTCGCG CCGCATCTAC
GCCTCCGCTG CGCAGGGCTG GGATCGTCGC TGGCGGCTGA TCCTCGCCGT CGGCGAGCTT
GCGGCCAGGG ACCGCGAGCG CCTGCGCAGG GCGCTGTTCT GGCAGGGCTT CGGCGCCCTC
GACGGGGACT GCTTCGTGCA TCCGAGCGCG GACCTCATCA CCGCCTTCGA CGCGCTCGTC
GGGGAGGGGT TGGGTGGGCT GCTGCCGCGG CTCAAGCCCC TGATGGCTGC GGATGCGGCC
CTGGGTGCGG CGGCCAGCGA CGCCGACCTG GTGCATGCGG CATGGAATCT CGAGCGCCTG
GCGCAGACCT ATCGCGAATT CGTCGACTGC TACCAGCCCG TGCTGGCCCA GCTCCGCGAT
GGCGCCAGCG AGTCCGGGGA TGAGAACGCC TTCCTCATGC GGATGCTGCT GATCCACGAC
TACCGCCGCC TGCTGCTGCG CGATCCCGGA TTGCCCGACG TGCTGCTGGC GAGCGACTGG
CCGGGGCAGC GTGCGCGGCT GCTGTGCCGC GAACTCTACC GTCGGCTGCT GGTGCCGTCC
GAGCGCCATA TCGACGCTCA CCTCCGCCTC GCCGACGGCC GCACGCCCGA GGCGTCGCCC
CGCCTTCTCG CGCGCTTCCA GGACGCCGAC CCGCTGCGCG GCGCCGCCTG A
 
Protein sequence
MTTSIQDRLE AFRKQDRVQA GSLIISVFGD AVLPRGGRIW LGSLIRLLEP LGLNERLVRT 
SVFRLARDEW LVSEPCGRRT DYMLTPSGLQ RIEEASRRIY ASAAQGWDRR WRLILAVGEL
AARDRERLRR ALFWQGFGAL DGDCFVHPSA DLITAFDALV GEGLGGLLPR LKPLMAADAA
LGAAASDADL VHAAWNLERL AQTYREFVDC YQPVLAQLRD GASESGDENA FLMRMLLIHD
YRRLLLRDPG LPDVLLASDW PGQRARLLCR ELYRRLLVPS ERHIDAHLRL ADGRTPEASP
RLLARFQDAD PLRGAA