Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1514 |
Symbol | |
ID | 7083596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1692364 |
End bp | 1693314 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643698531 |
Product | transcriptional regulator, PaaX family |
Protein accession | YP_002355168 |
Protein GI | 217969934 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.139923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACTT CCATCCAAGA TCGCCTTGAA GCGTTCCGCA AGCAAGATCG CGTGCAGGCC GGGTCGCTGA TCATTTCCGT CTTCGGCGAC GCCGTGCTGC CCCGAGGCGG ACGCATCTGG CTGGGCAGCC TGATCCGCTT GCTCGAGCCG CTTGGGCTCA ACGAGCGTCT CGTCCGCACA TCGGTGTTTC GGCTTGCGCG CGATGAATGG CTGGTCAGCG AGCCTTGCGG CCGCCGTACG GACTATATGC TGACGCCTTC CGGTCTGCAG CGTATCGAGG AGGCGTCGCG CCGCATCTAC GCCTCCGCTG CGCAGGGCTG GGATCGTCGC TGGCGGCTGA TCCTCGCCGT CGGCGAGCTT GCGGCCAGGG ACCGCGAGCG CCTGCGCAGG GCGCTGTTCT GGCAGGGCTT CGGCGCCCTC GACGGGGACT GCTTCGTGCA TCCGAGCGCG GACCTCATCA CCGCCTTCGA CGCGCTCGTC GGGGAGGGGT TGGGTGGGCT GCTGCCGCGG CTCAAGCCCC TGATGGCTGC GGATGCGGCC CTGGGTGCGG CGGCCAGCGA CGCCGACCTG GTGCATGCGG CATGGAATCT CGAGCGCCTG GCGCAGACCT ATCGCGAATT CGTCGACTGC TACCAGCCCG TGCTGGCCCA GCTCCGCGAT GGCGCCAGCG AGTCCGGGGA TGAGAACGCC TTCCTCATGC GGATGCTGCT GATCCACGAC TACCGCCGCC TGCTGCTGCG CGATCCCGGA TTGCCCGACG TGCTGCTGGC GAGCGACTGG CCGGGGCAGC GTGCGCGGCT GCTGTGCCGC GAACTCTACC GTCGGCTGCT GGTGCCGTCC GAGCGCCATA TCGACGCTCA CCTCCGCCTC GCCGACGGCC GCACGCCCGA GGCGTCGCCC CGCCTTCTCG CGCGCTTCCA GGACGCCGAC CCGCTGCGCG GCGCCGCCTG A
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Protein sequence | MTTSIQDRLE AFRKQDRVQA GSLIISVFGD AVLPRGGRIW LGSLIRLLEP LGLNERLVRT SVFRLARDEW LVSEPCGRRT DYMLTPSGLQ RIEEASRRIY ASAAQGWDRR WRLILAVGEL AARDRERLRR ALFWQGFGAL DGDCFVHPSA DLITAFDALV GEGLGGLLPR LKPLMAADAA LGAAASDADL VHAAWNLERL AQTYREFVDC YQPVLAQLRD GASESGDENA FLMRMLLIHD YRRLLLRDPG LPDVLLASDW PGQRARLLCR ELYRRLLVPS ERHIDAHLRL ADGRTPEASP RLLARFQDAD PLRGAA
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