Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1486 |
Symbol | |
ID | 7083568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1658420 |
End bp | 1659082 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643698503 |
Product | intradiol ring-cleavage dioxygenase |
Protein accession | YP_002355140 |
Protein GI | 217969906 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCACC ATTCCGGACT CCGCCGCCGC CTCGTCCTCG GCGGCAGCGC CACCCTGCTC TCCGCGCCGC TCGCCGCGGC GCAGCGCGTG CTGACGCCGA GCCAGATGCC CGGCCCCTTC TACCCGGTCA CCCCGCCGCT GCACAAGGAC AACGACCTCA CCCGGGTCGA AGGCCGCAGC GGTCGTGCCG CCGGGCAGAT CGCCGACCTG TCGGGCCGCG TGCTCGACCT CGACGGCCGC CCGCTGGCCG GCCTGCGCGT GGAGATCTGG CAATGCGACG CCAACGGCCG CTACCGCCAC CCGCGCGATC GCGCCGACGT GGAGGAGGAC CCGGACTTCC AGGGCTTCGG CCACACCCTC ACCGACGCCG ACGGGCGCTA CCGCTTCCGC ACCATCCGCC CGGTGCCCTA CCCAGGACGC ACGCCGCACA TCCACGCCGC GGTGTTCCAG GAAGGCGGGC GTCCCTTCGT CACCCAGATC TATGTCGCCG GCGAACCGCT CAACCAGCGC GACGGCCTCT TCATGCGCGT GCCCGAGGCG CTGCGCCCGC TGCTGCTGGC GGACTTCGTC GCGGCGGACG ATCCGGTCGC CACGCTGGCG GCGGAGTTCG ACTTCGTGCT GGCGCCGGCG CTGGCGGGAC TGTTCGAGGC GAGCACGGCC TGA
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Protein sequence | MSHHSGLRRR LVLGGSATLL SAPLAAAQRV LTPSQMPGPF YPVTPPLHKD NDLTRVEGRS GRAAGQIADL SGRVLDLDGR PLAGLRVEIW QCDANGRYRH PRDRADVEED PDFQGFGHTL TDADGRYRFR TIRPVPYPGR TPHIHAAVFQ EGGRPFVTQI YVAGEPLNQR DGLFMRVPEA LRPLLLADFV AADDPVATLA AEFDFVLAPA LAGLFEASTA
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