Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1477 |
Symbol | |
ID | 7083560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1645403 |
End bp | 1646791 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643698495 |
Product | Carbohydrate-selective porin OprB |
Protein accession | YP_002355132 |
Protein GI | 217969898 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA CCCTTGGACT CGGCGCCTTG ATCTCCGCGC TCGGCACGTC CATGCCGCTG CAGGCCATGC CCTACGACAC GCCCGACACC TGGGGCGGCG ATCTCGAATC CCGCGCCCGC CTGACCGGCA ACTGGGGCGG TGCGCGCGAC GACATGGCGA AGAAGGGGGT CGTCCTCGAC ATGGACGTGT ACTGGATGCC GCAGAAGATC ACCAGCGGCG GGCGCGACAG CGCCAGCGGC GACTGGGGCA ACGCGATCCT CACCCTCAAC GTGGATACGC AGAAGCTGGG GCTGTGGCCC GGCGGCTTCT TCAAGCTCCA GACCGTGACC AGCTTCGGCG ACACGCTGCT GAAGGAAACC GGCGCCATCG TGCCGGCCAA CCTGTCGTGG ATGCTGCCGA CCATCACCCC GGACACCGGC GTGCAGGAGA TCACCTACAC GCAGTTCCTC AGCCAGCATT TCGGCGTGTT CCTGGGCAAG ATCAACGCCA TCGCGCCGAC CAACGTGCTG CATGGCGACT ACACCACCGG CTTCCAGAAC ACGGGCATAA ACATGCCACT CGCGCTCGCC ATGGTTCCGC TGTCGGCGTA TGGGATCGGC GCGCTGTACC TGCCCTCGCA CGACGTGACG CTGGCCGGCA TGGTGCTGGA TGCGAACGGC ACGATCAAGA ACGACAACCT GAGCAATGCC TTCGACGACG GCATCATGGC GCTCGCCAGC GCGGACCTGA AGATCCGGCC CTGGGGCCTC CCGGGCCACC AGAACCTGAC CGTCGCCTGG AGCAACAAGG ACCGCACCTC GCTCGTCCAG GATCCGTCCA ACATCGCCGG ACTTCTGCTC ACCGCGCACT TCCCGCGCCT CGGCAACCCC GGCCCGATCC TCAGCGAGAT CCTCGACGCG CATCCCGTGG CCGCCAAGAT TCCCCCCGAC CCCTTGAACA AGGAAAGCGA AACCTGGGCC GCCGTCTACA GCTTCGAACA GTTCGTCTGG CAGCCCGCGG GTGACCCGAA GCGCGGCATC GGCACCTTCT TCAGCGTCGG CGTAAGTGAC GGCAAGGCGA ACCCGATCCG CTACAGCTAC TCGCTCGGGC TGGTCGGCAA GGGCGTGGTG CCGGGCCGGC CGAACGACGA CTTCGGCCTC GGCTGGGCGC GCACCGAGTT CAGCGACCAC TTCGTGCCCT ACCTGCGCGA TCGCTTCAAC CTCGGCCTCG ATCACGAAGA CGTCGTCGAG CTGTACTACA AGGCCTCGAT CACCCCCTGG CTGAGCATCA CTCCCAGCCT GCAGGTCGTC TCCCAAGGGC TGAACAAGGT GTTCAACGCG AGCGCACCCG GCTTCGAAGA CCTGGACACC GCCTACATCG CAGGCGTGCG GGTCGGCGTA CGCTTCTGA
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Protein sequence | MKKTLGLGAL ISALGTSMPL QAMPYDTPDT WGGDLESRAR LTGNWGGARD DMAKKGVVLD MDVYWMPQKI TSGGRDSASG DWGNAILTLN VDTQKLGLWP GGFFKLQTVT SFGDTLLKET GAIVPANLSW MLPTITPDTG VQEITYTQFL SQHFGVFLGK INAIAPTNVL HGDYTTGFQN TGINMPLALA MVPLSAYGIG ALYLPSHDVT LAGMVLDANG TIKNDNLSNA FDDGIMALAS ADLKIRPWGL PGHQNLTVAW SNKDRTSLVQ DPSNIAGLLL TAHFPRLGNP GPILSEILDA HPVAAKIPPD PLNKESETWA AVYSFEQFVW QPAGDPKRGI GTFFSVGVSD GKANPIRYSY SLGLVGKGVV PGRPNDDFGL GWARTEFSDH FVPYLRDRFN LGLDHEDVVE LYYKASITPW LSITPSLQVV SQGLNKVFNA SAPGFEDLDT AYIAGVRVGV RF
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