| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1417 |
|---|
| Symbol | |
|---|
| ID | 7083499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 1577717 |
|---|
| End bp | 1580176 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643698434 |
|---|
| Product | peptidase S16 lon domain protein |
|---|
| Protein accession | YP_002355072 |
|---|
| Protein GI | 217969838 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.185581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC CGCTCACGCC GCCGGCCCCC TTGCCCGTCG AGCGCCTGGC GACTCGCTGC
GACCCGGCAG CGCTCGGCAT CGAAACCTCC GCCCAACTGC CCGAGCTCGA CGTCGCCCGC
CTCCACGGCC GCGCGGTCGA CGCGATCCGG CTCGGCCTCG ACATCCGCGC CGAGGGCTAC
AACCTCTTCG TGCTCGGCGA CCCCGGCAGC GGCCGCCACG AGCTCGTCCG CCGCCTGCTC
GAGGACACGC GCGGCCGCGG CGATGCACCC GCGGACTGGT GCTACGCATG GAACTTCGCC
AACGCCGCCC AGCCTCGGCT GCTGCGCCTG CCCTGCGGGC GCGGCCCGGC GCTGCGCGAC
GATCTGGCCC GCTTCGTCGA GGAGCTGGTG CCGGCGATCG GCGCGGTGTT CGAGAGCGAG
GAGCACCGCA ACCGCATCGA GGCCCTGCAG GAGGAGGCCA AGACGCGCGA GGAGAGCGCC
TTGCGCAGCC TCGGCGACGA GGCCCAGAAG CTCGGCGTCG CGCTGCTGCG CACCCCGCAC
GGCTTCGCCT TCCTGCCGAT GAAGGACGAG GGCAGCACGC TCACGCAGGA AGAATTCGAG
CAGCTGCCCG AGGCACGCCA GCACGAGCTC GGCGAGCACA TCCGCGCGCT GCACGAGCGC
CTGCACCGCC TGATGGGCGA TTTCCCGCGC TGGCGGCACG AGCTGCAGAA CCGCATCCGC
GACGCCGGGC GCGAGGCGAT CCGCGCCACC GTCACCCACA TGGTCGACGA ATTGAAGGCG
CGTCACGCAG ACCTGCCCGA GGTGTGCGCG CATCTGGACG CGGTGCTCGC CGACGTCGTC
GCCAGCGGCG AGTCGCTGCG CGCGACGCCG CACGCCGACG AGGACAGCGA GACGCTGACC
TACACCGGCA GCATCAGCGT GCAGCGCTAT CTGGTGAACC TGCTCGTCGC CAACCCCGCC
GACGGCACCC GACCGATGGT GTACGAAGAC CACCCCACGC TGCAGAACCT GGTCGGCCGC
ATCGACCACC TGGTGCACAT GGGCACCCTG GTGAGCAACT TCACCCTGAT CCGCGCCGGC
GCCCTGCACC GCGCCAACGG CGGCTTCCTG GTGCTCGATG CGCTCAAGCT GCTGTCCCAG
CCCTTCGCCT GGGAGGGGCT CAAGCGCGCG CTCAAATCCG CACGCCTGCG CATCGAGTCG
CTCTCGGAGC TGATCGGGGT GACCGGCTCG GTGCAGCTCG AGCCCGAGCC GATGCCGCTC
GAGCTCAAGG TGGTGCTGAT CGGCGATCGC CTGACCTACT ACCTGCTCGG CCGCTACGAT
CCCGAGTTCG CCGCGCTGTT CCGCATCAAC GCCGACATGG AGAGCGAGAT CGAACGCTCC
GCGGACAACA CCGCCGCTTA CGCCTGCCTG CTCGCCACCC TGGCGCGCCG CGCCGGCCTG
CCGCCCTTGT CGGCGCCGGC GCTGGCGCGC CTGATCGAGC ACGCGGCGCG CCTCGCCGCC
GACGCCGAGC GCCTGAGCGC GCGCACCCAG CCGCTCGACG ACCGCCTGCG CGAGGCGGCC
CACTTCGCCC TCGCCGCCGG CGCCGCGCGC ATCGAGTGCG AGCATGTGGA CGCCGCGATC
GCGGCCCACC GGCGCCGCCA CGAACGCATC CGCCTCGGCC ACCTCGACCA GATCCTGCGC
GGGCAGTGGC TGATCGACAC CGCGGGCAGC CACGTCGGCC AGGTCAATGG CCTGGCGGTG
GTGCCGCTCG GCGAAGACAG CTTCGCCCAC CCGCAGCGCA TCACCGCCAC GGTGCGCGCC
GGCGCCGGCG AGGTCATCGA CATCGAGCGC GAGGTCAAGC TCGGCGGGCC GATCCACTCC
AAGGGCGTGC TGATCCTGTC CGCCTTCCTC GCCGCACGCT TCGGCTGGAT GCTGCCGCTC
TCGCTCAAGG CGAGCCTGGT GTTCGAGCAG TCCTACGGTG GCGTCGAGGG CGACAGCGCC
TCGCTCGCCG AGCTGGTGGC CCTGCTCTCG GCGCTCTCGG GCGTGGCGGT GAAGCAGTCG
CTCGCCGTGA CCGGTTCGGT GAACCAGTTC GGCGTCGTGC AGCCGGTAGG CGGGATCAAC
GAGAAGATCG AGGGCTTCTT CGACCTGTGC GCGGTGCGCG GTCTCGACGG CCGCCAGGGC
GTGCTGATTC CGCGCGCCAA CGTCTGCCAC CTGATGCTGC GCGACGACGT GGTCGAGGCG
GTGCGGGCCG GGCGCTTCGC CGTGTGGGCG GTGGCCGACG CCGACGAGGC GGTGGAGCTG
CTCACCGGCG TGGCGGCGGG CGTGCCGGAC GAGCAGGGCA GGATGGCTGC GGGCTCGATG
AGCCGGCGCG TCGTCGAGGG CCTGCGCAAG CTGGCGAGGA TGCAGCGCGA GTTTGCGCGG
CGGGGACACG AAGACGACGC CGACGCGGCC GGGCATCGAG GCCGGCCGCA CGCATCCTGA
|
|---|
| Protein sequence | MSAPLTPPAP LPVERLATRC DPAALGIETS AQLPELDVAR LHGRAVDAIR LGLDIRAEGY
NLFVLGDPGS GRHELVRRLL EDTRGRGDAP ADWCYAWNFA NAAQPRLLRL PCGRGPALRD
DLARFVEELV PAIGAVFESE EHRNRIEALQ EEAKTREESA LRSLGDEAQK LGVALLRTPH
GFAFLPMKDE GSTLTQEEFE QLPEARQHEL GEHIRALHER LHRLMGDFPR WRHELQNRIR
DAGREAIRAT VTHMVDELKA RHADLPEVCA HLDAVLADVV ASGESLRATP HADEDSETLT
YTGSISVQRY LVNLLVANPA DGTRPMVYED HPTLQNLVGR IDHLVHMGTL VSNFTLIRAG
ALHRANGGFL VLDALKLLSQ PFAWEGLKRA LKSARLRIES LSELIGVTGS VQLEPEPMPL
ELKVVLIGDR LTYYLLGRYD PEFAALFRIN ADMESEIERS ADNTAAYACL LATLARRAGL
PPLSAPALAR LIEHAARLAA DAERLSARTQ PLDDRLREAA HFALAAGAAR IECEHVDAAI
AAHRRRHERI RLGHLDQILR GQWLIDTAGS HVGQVNGLAV VPLGEDSFAH PQRITATVRA
GAGEVIDIER EVKLGGPIHS KGVLILSAFL AARFGWMLPL SLKASLVFEQ SYGGVEGDSA
SLAELVALLS ALSGVAVKQS LAVTGSVNQF GVVQPVGGIN EKIEGFFDLC AVRGLDGRQG
VLIPRANVCH LMLRDDVVEA VRAGRFAVWA VADADEAVEL LTGVAAGVPD EQGRMAAGSM
SRRVVEGLRK LARMQREFAR RGHEDDADAA GHRGRPHAS
|
|---|
| |