Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1380 |
Symbol | |
ID | 7084501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1534749 |
End bp | 1536320 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643698397 |
Product | Chloride channel core |
Protein accession | YP_002355035 |
Protein GI | 217969801 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.332238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAC AGCCACCGAT GAGCCCCGAG CGGAACCCCG CTGCTCCTGC ACAAGCCGAC GGCGCGCGCC CCGCTGCGCC GCCTCCCGAG CCGTCCGGAT CAGCGGTCGC GCCCCGCACC GCCGCACGCG GGCGCCCATT CGCCCGCCTG CTGCGCGGCG GGCGCCGCTA TGCCCTGCCC TGGCTGTCGC TGCGGCGCTG GCGGGTGCGC CTGCTGCTGG TGGGCGCGGC CTTGCTCGCC GGACTGGTCG CGATCGCCTT CGCGATCGGC GCCGAGCTGG CGATCGCCGC CCACGCCGGG CTGATCCGCG AGCGCCCCTG GCTCACCCTG CTGATCGCGC CCGCCGGCTT CGCCGCGCTG GCGTGGATCT CGCGCCGCTT CTTCCCCGGT ACCGAGGGCA GCGGCATCCC GCAGGCGATC GCGGCGTCGA TGTCGGATGA CGGCCGCGTG CGCCGCCAGC TGCTGTCGCT GCGCATCGCG CTGGCCAAGG TCTTCCTGAC CCTGGGCGGG CTGCTCAGCG GCGCCTCGGT GGGTCGCGAG GGCCCTTCGG TGCAGATCGG CGCCTCGGTG CTGCACCTGC TCGCCAGCCG CAAGCGCCAC CGCCGCATCG CCTCCAGCCG CGACCTCATC GTCGCCGGCA GCGGCGCCGG CATCGCCGCG GCCTTCAACA CCCCGCTCGG CGGCATCATG TTCGCGATCG AGGAGATGTG CCGCTACCGT GCCTTCCAGG CCAACAGCAC CACGCTCACC GCGGTGATCT TCGCCGGCCT GATGTCGCTC GCCGTGCTGG GCAACTACAC CTACTTCGGC CGCACCCTGG CGAGCCTGGG CTGGCCCGAC GGGATCTGGC CGGTGCTCGC CTGCGGGGTG GCCGGCGGCC TGCTCGGCGG CATCTTCACG CGCGTGCTGG TGGCGTCCGC ACGCGGCCTG CCCGGCCGCC TCGGCAGGAT CGCCGAGGGC CAGCCGGTCG CCTTCGCGGC GATGTGCGGC CTGCTCACCG CGTTGATCGG ACTGGCCAGC GGCGGCGTCA CCTACGGCAC GGGCTATGCG GAATCCAAGG CCGCGCTCGA GGGCAGCGCG GCCTTGCCGG CGGCCTTCAC GCTGATGAAG CTGGCGGTGA TCTGGCTGGT CTTCGCGTCC AAGATCCCCG GCGGCATCTT CGCCCCCGCG CTCGCGGTGG GCGCCGGCCT GGGCGCCGAC CTCGCCCTGC TGCTGCCGGG CGAGCAGGAC GCGGCGATCC TGGTGCTGGG CATGGTGGCC TTCCTCGCGG CGATGACGCA GACGCCGATC ACCTCCTTCG TGATCGTCAT GGAGATGACC GCCAACCACC AGATGCTGCT GCCGCTGATG GCCACCGCGG TGGTGGCCCA CGGCGTGGCG CGCTCGGTGG CGCCGGTACC GCTCTACCAC GCGCTCTCCC ACCCCTGGCT GCGGCGCGCC GAGAAGCGGG CGCACGAAAA ACGCCCGCGC CCTGCGCACC CCCCGGTGGG TGCGCAGGGC GCGGGCGCCG CGAAGCCGGC TGTGGAACCG CCGTCCTCAG CGGATGCCGG CGCGCCGGAT CAGCGCCTGT AG
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Protein sequence | MAAQPPMSPE RNPAAPAQAD GARPAAPPPE PSGSAVAPRT AARGRPFARL LRGGRRYALP WLSLRRWRVR LLLVGAALLA GLVAIAFAIG AELAIAAHAG LIRERPWLTL LIAPAGFAAL AWISRRFFPG TEGSGIPQAI AASMSDDGRV RRQLLSLRIA LAKVFLTLGG LLSGASVGRE GPSVQIGASV LHLLASRKRH RRIASSRDLI VAGSGAGIAA AFNTPLGGIM FAIEEMCRYR AFQANSTTLT AVIFAGLMSL AVLGNYTYFG RTLASLGWPD GIWPVLACGV AGGLLGGIFT RVLVASARGL PGRLGRIAEG QPVAFAAMCG LLTALIGLAS GGVTYGTGYA ESKAALEGSA ALPAAFTLMK LAVIWLVFAS KIPGGIFAPA LAVGAGLGAD LALLLPGEQD AAILVLGMVA FLAAMTQTPI TSFVIVMEMT ANHQMLLPLM ATAVVAHGVA RSVAPVPLYH ALSHPWLRRA EKRAHEKRPR PAHPPVGAQG AGAAKPAVEP PSSADAGAPD QRL
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