Gene Tmz1t_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1324 
Symbol 
ID7084445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1460261 
End bp1460929 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID643698341 
Productleucine export protein LeuE 
Protein accessionYP_002354979 
Protein GI217969745 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0341072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGGCA TCACCGACCT CTTCACCTTC GTCCTCGGCA CCATCTTCAT CGTCCTGCTG 
CCCGGCCCCA ACTCGCTCTA CGTGATGGCG GCGGCCTCGC GCTGGGGGGT GCGCGCCGGC
TACCAGGGCG CGGCGGGGAT CTTCGTCGGC GACACCGTCC TGATGCTGCT CGCGGTGACC
GGCATGGCCT CGGTGCTGCG GGCCACGCCC GAGCTGTTCA TGGTGATCAA GTACGCGGGC
GCGGCCTACC TGGCCTGGGT GGGGCTCGCG CTGCTGCGCG GCGCGCTGGC GACCTGGCGG
CGCGGGGACG AGACGGCGGA CGCGGTCGGC GACGGCAAGC CCGACTATCC GCCGCTGCGC
AGCACGCCGC ACCCCTTCCG CACCGCGCTG CTGATCAGCC TGATGAACCC GAAGGCGATC
CTGTTCTTCG TGTCCTTCTT CATCCAGTTC GTCGATCCGG CCTACGAACA CCCGGCGCTG
TCCTTCGTGA TCCTGGGTGT GATCGTGCAG GTGTGCAGCG TGCTCTACCT GTCCACGCTG
ATCTTCGCCG GCGCGCGCCT GGCTGCGCAG TTCCGCCGCC ACCGCCGCAT GGCTGCGGGG
GCGACCGCGG GGGTGGGCGG GGTCTTCATC GGCTTCGGCG CCAAGCTCGC GACCGCGACG
CTGGGCTAG
 
Protein sequence
MYGITDLFTF VLGTIFIVLL PGPNSLYVMA AASRWGVRAG YQGAAGIFVG DTVLMLLAVT 
GMASVLRATP ELFMVIKYAG AAYLAWVGLA LLRGALATWR RGDETADAVG DGKPDYPPLR
STPHPFRTAL LISLMNPKAI LFFVSFFIQF VDPAYEHPAL SFVILGVIVQ VCSVLYLSTL
IFAGARLAAQ FRRHRRMAAG ATAGVGGVFI GFGAKLATAT LG