Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1268 |
Symbol | |
ID | 7085432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1401610 |
End bp | 1402344 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643698284 |
Product | LrgB family protein |
Protein accession | YP_002354923 |
Protein GI | 217969689 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.796832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGA ACCTCGAGGA AATCTGGGTC TATCTGTCCA CCTCGCCACT CCTCGGGCTG ACGCTGACCC TGCTCGCCTA CCAGGCTGCA TTCTGGATCT ACAAGCGCGT CGGCTTCCAT CCGATCGCCA ACCCGGTGCT GATCAGCGTG GCCATCCTCG CCAGCCTGCT GCTCGCCACC GGTACGCCCT ACCAGCGCTA TTTCGACGGC GCGCAGTTCG TGCACTTCCT GCTCGGCCCG GCCACGGTCG CACTGGCGAT CCCGCTCCAC GCGCAGTGGC CGCGCCTGAA GTCGATGGCC GGCCCGTTGC TGATCGCGCT CGTCGCCGGC TCGCTGACCG CGGCGCTGTC GGCCTGGGGC ATCGGCGCCC TGCTCGGCGG CAGCCGCGAA TCGCTGATGT CGCTCGCCCC CAAGAGCGTG ACCACGCCGA TCGCCATGGG CGTGGCCGAG CGCATCGGCG GCCTGCCCTC GCTCACCGCG GTGCTGGTGA TCAGCGCCGG CATCATCGGC GCGGTGGCCG GCCGCAGCGT GCTGAATCGC CTGCACATCG GCGATCACGC AGTGCGCGGC TTCGCGATCG GCATCGCCTC GCACGGCATC GGCACCGCGC GCGCCTTCCA GGTCAGCGAG CAGGCGGGCG CCTTCGCCGC GCTGGCGATG GGATTGAACG GACTGATCAC CGCGGTGTCC CTGCCCTGGA TCATGCCCTG GGTGGAGCGG CTGTTCGCGA GCTGA
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Protein sequence | MNPNLEEIWV YLSTSPLLGL TLTLLAYQAA FWIYKRVGFH PIANPVLISV AILASLLLAT GTPYQRYFDG AQFVHFLLGP ATVALAIPLH AQWPRLKSMA GPLLIALVAG SLTAALSAWG IGALLGGSRE SLMSLAPKSV TTPIAMGVAE RIGGLPSLTA VLVISAGIIG AVAGRSVLNR LHIGDHAVRG FAIGIASHGI GTARAFQVSE QAGAFAALAM GLNGLITAVS LPWIMPWVER LFAS
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