| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1115 |
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| Symbol | |
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| ID | 7084644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1218096 |
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| End bp | 1220288 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643698130 |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_002354770 |
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| Protein GI | 217969536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.335686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACG ACCGGGACGA CTTCATCAAC CTGGGCGAGA TCATCGCCGT CCTGCTCGAA
TACAAGTGGC TGATCCTCGC CGTCACCTTC TTCGCCGTCT TCATCGGCGC GGTGGTGGCC
TTCGTGTCCA CGCCCATCTA CCGCGCCGAC GGGCTGGTGC AGGTGCAGGA CAGCAAGGGG
CCCAAGGGCG GGCTGGCCGC GCTGCGCGAC GTCGAGGCCG TGCTCGGCGA GAACAGCTCG
GTCACCGCCG AGCTCGAGAT CCTGCGCTCG CGCATGATCC TCGGCCGCGT GGTCGAGCGC
CTGCGCCTCG ACATCCGCGC CACCCCCGAC TACTTCCCCA TCTTCGGCCG CGCCCTCGCG
CGCCGCTATA ACGGCGACCA GCCCGCCGCG CCGCTGCTCG GCCTGGGCAG CTACGCCTGG
GGCGGCGAGC GCATCACCGT GCAGACCCTC GAGGTGCCGT CCTACCTGGT CGGCCTGCCG
CTCACCCTCA TCGCCGGCGA CAACGGCGGC TTCACCCTCT ACGACGACCA GGACCAGCCC
CTGCTCGACG GCAGCGTCGG CCAGCCCGCC AGCAGCGCCG ACGGCAAGAC CACGCTCTTC
GTCGCCGAGC TCGTCGCCCG CCCCGGCACC CATTTCGATC TCGCCCGCAT CAGCCAGATC
CAGGCCATCG CCGCCCTGCG CGAAGACCTC GAAGTGCGCG AGCGCGCCCG CCAGTCCAAC
GTGATCGAAG CCGCCTACAG CGACGCCGAC CGCGCCGAAG CCGAGCGCCT GCTCAACGAA
GTCCTCAACG CCTACGTGCG CCAGAACGTC GAATACCGCT CCGCCGAGGC CGACGCCACC
CTGGCCTTCC TCGAAAAGCA GCTCCCCGAG CTCAAGGCCC AGCTCGACAC CGCCGAAGCC
GCCTACAACG ACTACCGCCA GACCCGCGGC TCGGTTGACC TCACCCTCGA GACCCAGTCG
GTGCTCAGCT CCATCGTCAA GGTGGACGCC GACGTCGTCG AGCTCCAGCA AAAGCGCGAC
GAGCTGCGCC AGCGCTTCAC CCCCGAGCAC CCCCAGGTCA AGGCCATCGA CTCGCAGCTC
GGCCGCCTGC GCGCCGTGCG CGGCACCCTC GACAAGGACG TCAATCGCCT CCCCGACACC
CAGCAGACCG CGCTGCGCCT GCGCCGCGAC GTCGAGGTCG CCACCGCGCT CTACACCAAC
CTGCTCAACA GCGCCCAGCA GCTGCGCGTG GCGCGCGCCG GCACCGTCGG CGACGTGCGC
GTGATCGACC CCGCCGCCAC CGCGCCGCTG CCGGTCGCGC CGCGCAAGGC GCTCATCCTG
CTGCTCTCGG GCGTGCTCGG CGTGCTCGGC TCGCTCGGCC TGGTGTGGGC CATCCGCAGC
CTGCGCGTGG TCGTCGAAGA CCCGCAGACC ATCGAGCGCG AGCTCTCGCT GCCGGTGTAC
GCCACCGTGC CCGACAGCAA GGACGAAGCC GTGCTGTCGC GCGCCATCGC CCGCGGCAAG
ACCGACAAGG GCCAGCTCCT CGCCACCGCC CACCCCGACG ACGACGCCAT GGAGAGCCTG
CGCAGCCTGC GCACCACGCT GCACTTCGCG CTGCTCGGCG CCGAGAAGGG CTCGGTGCTC
ATCACCGGCC CGGCGCCCGG CGTGGGCAAG AGCTTCATCA GCAAGAACCT CGGCGCCGTG
CTCGCCCAGG CCGGCAAGCG CGTCATGCTG GTCGACGGCG ACCTGCGCAA GGGCCACATC
AACAAGGCCT TCGGCATCGG CCGCGGTGTG GGCGTGTCCG ACTACATCAT GGGCGCCGCC
AGCATCGAGC AGATCGTCAA GCCCACCGGC ATCGACAACT TCTCCCTCGT CACCACCGGC
CAGATCCCGC CCAACCCGTC CGAGCTCCTC ATGCACCCGC GCTTCGCCGC GCTGCTCGCC
GAGCTCGAAA AGCAGTGCGA CGTGCTCATC ATCGACGCGC CCCCGGTGCT CGCCGTGTCC
GACGCCGCCA TCATCGGCCG CCAGGTCGGC GCCACCCTCC TGGTCGCCCG CGCCGGCCGC
CACCCGGTGC GCGAGCTCGA GCAGGCCATC AAGCGCTTCG ACCAGGCCGG CGTGGAGGTC
AAGGGATTCG TGTTCAACGG CTTCGACCTC ACCCGACAAC GGCATCGCTT CGGGTACGAG
GGGTATCACT ACCAGTACAA GTACAAGGCG TGA
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| Protein sequence | MRDDRDDFIN LGEIIAVLLE YKWLILAVTF FAVFIGAVVA FVSTPIYRAD GLVQVQDSKG
PKGGLAALRD VEAVLGENSS VTAELEILRS RMILGRVVER LRLDIRATPD YFPIFGRALA
RRYNGDQPAA PLLGLGSYAW GGERITVQTL EVPSYLVGLP LTLIAGDNGG FTLYDDQDQP
LLDGSVGQPA SSADGKTTLF VAELVARPGT HFDLARISQI QAIAALREDL EVRERARQSN
VIEAAYSDAD RAEAERLLNE VLNAYVRQNV EYRSAEADAT LAFLEKQLPE LKAQLDTAEA
AYNDYRQTRG SVDLTLETQS VLSSIVKVDA DVVELQQKRD ELRQRFTPEH PQVKAIDSQL
GRLRAVRGTL DKDVNRLPDT QQTALRLRRD VEVATALYTN LLNSAQQLRV ARAGTVGDVR
VIDPAATAPL PVAPRKALIL LLSGVLGVLG SLGLVWAIRS LRVVVEDPQT IERELSLPVY
ATVPDSKDEA VLSRAIARGK TDKGQLLATA HPDDDAMESL RSLRTTLHFA LLGAEKGSVL
ITGPAPGVGK SFISKNLGAV LAQAGKRVML VDGDLRKGHI NKAFGIGRGV GVSDYIMGAA
SIEQIVKPTG IDNFSLVTTG QIPPNPSELL MHPRFAALLA ELEKQCDVLI IDAPPVLAVS
DAAIIGRQVG ATLLVARAGR HPVRELEQAI KRFDQAGVEV KGFVFNGFDL TRQRHRFGYE
GYHYQYKYKA
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