| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1081 |
|---|
| Symbol | |
|---|
| ID | 7084610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1178770 |
|---|
| End bp | 1180119 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643698098 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_002354738 |
|---|
| Protein GI | 217969504 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.333924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGGA AGGAAGTGTT CGACGATGTC GCCCCGAGGG GCGACATCGT CGGCGGCGCC
TCGGCTACTG TGCCCGTATC GGGTCAGTCC GAGGAGGCGC GTATGCTCAC CAGGGAACGC
TGGGAAGAGG TCCATCGTTT GCGTGCAGGC GGGCTGAGCG TGTCGGCCAT CGCACGCGGG
CTCGATCTCG ATCGCAAGAC GGTTCGACGC TGTCTGCGCC AGCCGGCGTG GTCGCCGTAC
CGGCGTGAGG CGTCGGCCGT GTGCCTGCTG GATGCACATC GGCCGTGGCT GCTCGAGCGG
GCGCCGCAAG TTGGCTACTC GGCACGGATC CTGTACCAGG AGCTTCGAGC TCGGCACGGC
TACCGGGGCG GCTACGACAC GGTCAAGAAC GCGGTGCGAC CGCTGCGCAA GGAGGCGACA
CTCGCGGCGT TGACGCAGCG GCGCTTCGAG ACCGGACCCG GCGAACAGGC CCAGGTCGAT
TGGGGGCAGG TGAAGGTACG CTTGGGCGAC GAGACCAGGA CCGTTCACGT GTTCGTGATG
ACCCTGGGGT ACTCGCGGCG ATGCTGGGTC GAGGGCTTCG AGAACGAACG ACTGACCAGC
CTGCTGGCGG CCCACGAGCA TGCCTTTGCC CACTTCGGCG GGCGCACGGC GCAACTGCTC
TACGATCGCA TGCGCACCGT GGTGCTCGGC AGCGAGGCCG GCCGCATCCG CTGGAACCCG
ACCTTCGAGG CCTTTGCGCG TCACTGGGGC TTCGAGCCCC GGCTGTGCAA GCCGTATCGG
GCGCAGACCA AGGGCAAAGT CGAATCCGGC GTGAAGTACG TCAAGCGCAA CTTCGTGCCA
GGGCGCAGCT TCCATGACCT GGACGACTTC AACGCGCAAC TGCTGCAGTG GGTGCAGGAG
GTGGCCGATG TACGCGTGCA TGGCACCACC CACCAGCGCC CGATCGAGCG CTTTGCCGAG
GAAGCGGCGG CACTGGTGCC GACCGCCAGC CAGGCGAGCT TCCTGCAGGC GATGGTGCGC
GACCGGGTGG TAGCCGATGA CTGGCTGGTG TCGATCGATG CCAATCGCTA TTCGGTGCCG
TGCCGGCTGA TCGGCAAGAC CGTACAGGTC GTGCGCGCCG GCGGCCTGTG GCAGATCCGC
TATCGCGGCG AGCTGGTGGC CGAGCACGCG GTGCTGGCCG GTCGCCATCA ACTGAGCATC
GAGCCTGAAC ACGGCCCGGG CGCGGCGGCC CGCAATGCCC GTCAGCGCTA CGGCACGGCC
CCCGCGCCAG CGCAGAGCTC CGTGCAGCAC GACGACTGGG TCGAGGTGCG CGATCTGTCG
ATCTACGAGC AGATGCTGGA GGCCGCATGA
|
|---|
| Protein sequence | MEGKEVFDDV APRGDIVGGA SATVPVSGQS EEARMLTRER WEEVHRLRAG GLSVSAIARG
LDLDRKTVRR CLRQPAWSPY RREASAVCLL DAHRPWLLER APQVGYSARI LYQELRARHG
YRGGYDTVKN AVRPLRKEAT LAALTQRRFE TGPGEQAQVD WGQVKVRLGD ETRTVHVFVM
TLGYSRRCWV EGFENERLTS LLAAHEHAFA HFGGRTAQLL YDRMRTVVLG SEAGRIRWNP
TFEAFARHWG FEPRLCKPYR AQTKGKVESG VKYVKRNFVP GRSFHDLDDF NAQLLQWVQE
VADVRVHGTT HQRPIERFAE EAAALVPTAS QASFLQAMVR DRVVADDWLV SIDANRYSVP
CRLIGKTVQV VRAGGLWQIR YRGELVAEHA VLAGRHQLSI EPEHGPGAAA RNARQRYGTA
PAPAQSSVQH DDWVEVRDLS IYEQMLEAA
|
|---|
| |