Gene Tmz1t_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1025 
Symbol 
ID7084009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1121620 
End bp1122366 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID643698044 
Productacetoacetyl-CoA reductase 
Protein accessionYP_002354684 
Protein GI217969450 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACGA CGCAACGGAC GGCGCTGGTG ACGGGAGGCA ACCGGGGATT GGGCGCTGCA 
ATCGCCCGTA CCCTGCACGA CGTCGGCCAC CGCGTGATCG TCACGCATAC CCCCGGCAAC
ATCACGATTG GCCAGTGGCA GCAAGCGCAA GCGACACAGG GCTACACATT TGCTGCCTAC
GGGGTGGATG TATCCGACTA CGAATCAACG CAGGAACTGG CGCGGCGCAT CCACGCCGAC
GGTCATCGGA TCGATATCCT GGTGAACAAC GCCGGCATCA CCCGCGACGC AACGCTGCGC
AAGCTCGACA AGGCCGGGTG GGATGCCGTA CGGCGCACCA ACCTAGACTC CATGTTCAAC
GTCACCAAGC CGTTCGTCGA TCCGATGGTC GAGCGCGGCT GGGGTCGCAT CGTCAATATC
TCGTCGATCA ACGGCAGCAA GGGCCAGTTC GGGCAGACCA ATTATTCGGC GGCCAAGGCC
GGGGTACATG GATTCACCAA GGCGCTCGCA CAGGAGGTGG CGCACAAGGG CGTGACGGTC
AACACCGTCT CGCCGGGCTA TTTCGCCACC AAGATGGTGA TGGCGGTGCG CGAGGATGTG
CGCCAGAAGA TCATCGATGC GATTCCGATT GGCCGTCTCG GTCAGCCGGC CGAGATTGCG
GCACTTGTCG CCTTCATCGC CAGCGAAGCC GCCGCCTTTA TGACCGGCAG CAACGTGGCG
ATGAACGGCG GCCAGCATAT GTATTGA
 
Protein sequence
MYTTQRTALV TGGNRGLGAA IARTLHDVGH RVIVTHTPGN ITIGQWQQAQ ATQGYTFAAY 
GVDVSDYEST QELARRIHAD GHRIDILVNN AGITRDATLR KLDKAGWDAV RRTNLDSMFN
VTKPFVDPMV ERGWGRIVNI SSINGSKGQF GQTNYSAAKA GVHGFTKALA QEVAHKGVTV
NTVSPGYFAT KMVMAVREDV RQKIIDAIPI GRLGQPAEIA ALVAFIASEA AAFMTGSNVA
MNGGQHMY