Gene Tmz1t_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1017 
Symbol 
ID7084001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1112602 
End bp1113720 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID643698036 
ProductABC-2 type transporter 
Protein accessionYP_002354676 
Protein GI217969442 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACTT CCGCATTCTC GTTCACCCGC CTGCGCGCCC AGTTCATCAA GGAAGTGCTC 
AGCGTCCTGC GCGATCCGCG CAGCCGCATG GTGGTGTTCG TGCCGCCGAT CCTGCAGTTG
CTAGTGTTCG CCTTTGCCGC GACGCTGGAA GTGCGCAACG TCGATATCGC CGTCTACGAT
CAGGATGCGG GGCGGTGGTC GCACGAGTTG GTACAGCGAC TGGACAGCGC CCGCTTCATC
ACCCACGTCC GGCATGTCGA CAGCCAGCAG CAGCTCCACG AGCTGATCGA CCGTGGCGAG
GTGATCGCCG CGCTCGCCAT CCCGGTGGAT TTCTCGCGCT CCATCGCGGC CGGCGAAAGT
GGCCGCGCGC AGGTACTGGT CGATGGCCGG CGCAGCAACT CCGGGCAGAT CACCGTGGCC
TATCTGTCCA CCATCGCCGC CGATGTCGGC GCCGAGGTCG TGCCCGACGC TCAGGCACCA
ACGCCCGTGG TCGTGCGCCA CTGGTTCAAC CCGAATCTGG TCTACCGCTG GTTCATCGTG
CCCGGGCTGA CGGGCATCCT GGCGCTGTTC AGCTCGCTCT TGATCACCTC GTTGTCGATC
GCGCGCGAGC GCGAGCTGGG CACCTTCGAC CAGTTGCTGG TGTCGCCCAC CTCGACGCCC
GAGATCATCA TCTCCAAGTC GCTGCCGGCA CTCGCAATTG GCACCGGGCT GGGCCTGTTC
ATGATCAGCG CGGGCGTCTT CCTGTTCGGC ATCCCATTTA CGGGCTCGTT TGCACTCCTG
CTTGCCAGCC TGGTGCTGTT CATCGCCTCG GTGGTCGGCA TCGGTCTGAT GATTTCCGCG
GTCAGCATGA CGCAGCAGCA GGCCATCCTG GGGGCGTTCG CCGTCGGCGT GCCGGCGGTG
CTGATGTCAG GCTTTGCGAC GCCTGTGGAA AACATGCCCG TCGTTCTGCA ATGGCTGGCT
CAGGCCATTC CGCTGACCCA TTTCCTCATC ATCGTCGAAG GCAGCTTTCT CAAGGCCATG
CCGCCCGGTG ACATTCTCGC CAGCCTGTGG CCGCTGGCGA TCATCGCCCT CGCCACGCTG
ACGATGGCCA CCGTATTCGT CCGAGGACGC CTGCAATGA
 
Protein sequence
MLTSAFSFTR LRAQFIKEVL SVLRDPRSRM VVFVPPILQL LVFAFAATLE VRNVDIAVYD 
QDAGRWSHEL VQRLDSARFI THVRHVDSQQ QLHELIDRGE VIAALAIPVD FSRSIAAGES
GRAQVLVDGR RSNSGQITVA YLSTIAADVG AEVVPDAQAP TPVVVRHWFN PNLVYRWFIV
PGLTGILALF SSLLITSLSI ARERELGTFD QLLVSPTSTP EIIISKSLPA LAIGTGLGLF
MISAGVFLFG IPFTGSFALL LASLVLFIAS VVGIGLMISA VSMTQQQAIL GAFAVGVPAV
LMSGFATPVE NMPVVLQWLA QAIPLTHFLI IVEGSFLKAM PPGDILASLW PLAIIALATL
TMATVFVRGR LQ