Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1017 |
Symbol | |
ID | 7084001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1112602 |
End bp | 1113720 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643698036 |
Product | ABC-2 type transporter |
Protein accession | YP_002354676 |
Protein GI | 217969442 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACTT CCGCATTCTC GTTCACCCGC CTGCGCGCCC AGTTCATCAA GGAAGTGCTC AGCGTCCTGC GCGATCCGCG CAGCCGCATG GTGGTGTTCG TGCCGCCGAT CCTGCAGTTG CTAGTGTTCG CCTTTGCCGC GACGCTGGAA GTGCGCAACG TCGATATCGC CGTCTACGAT CAGGATGCGG GGCGGTGGTC GCACGAGTTG GTACAGCGAC TGGACAGCGC CCGCTTCATC ACCCACGTCC GGCATGTCGA CAGCCAGCAG CAGCTCCACG AGCTGATCGA CCGTGGCGAG GTGATCGCCG CGCTCGCCAT CCCGGTGGAT TTCTCGCGCT CCATCGCGGC CGGCGAAAGT GGCCGCGCGC AGGTACTGGT CGATGGCCGG CGCAGCAACT CCGGGCAGAT CACCGTGGCC TATCTGTCCA CCATCGCCGC CGATGTCGGC GCCGAGGTCG TGCCCGACGC TCAGGCACCA ACGCCCGTGG TCGTGCGCCA CTGGTTCAAC CCGAATCTGG TCTACCGCTG GTTCATCGTG CCCGGGCTGA CGGGCATCCT GGCGCTGTTC AGCTCGCTCT TGATCACCTC GTTGTCGATC GCGCGCGAGC GCGAGCTGGG CACCTTCGAC CAGTTGCTGG TGTCGCCCAC CTCGACGCCC GAGATCATCA TCTCCAAGTC GCTGCCGGCA CTCGCAATTG GCACCGGGCT GGGCCTGTTC ATGATCAGCG CGGGCGTCTT CCTGTTCGGC ATCCCATTTA CGGGCTCGTT TGCACTCCTG CTTGCCAGCC TGGTGCTGTT CATCGCCTCG GTGGTCGGCA TCGGTCTGAT GATTTCCGCG GTCAGCATGA CGCAGCAGCA GGCCATCCTG GGGGCGTTCG CCGTCGGCGT GCCGGCGGTG CTGATGTCAG GCTTTGCGAC GCCTGTGGAA AACATGCCCG TCGTTCTGCA ATGGCTGGCT CAGGCCATTC CGCTGACCCA TTTCCTCATC ATCGTCGAAG GCAGCTTTCT CAAGGCCATG CCGCCCGGTG ACATTCTCGC CAGCCTGTGG CCGCTGGCGA TCATCGCCCT CGCCACGCTG ACGATGGCCA CCGTATTCGT CCGAGGACGC CTGCAATGA
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Protein sequence | MLTSAFSFTR LRAQFIKEVL SVLRDPRSRM VVFVPPILQL LVFAFAATLE VRNVDIAVYD QDAGRWSHEL VQRLDSARFI THVRHVDSQQ QLHELIDRGE VIAALAIPVD FSRSIAAGES GRAQVLVDGR RSNSGQITVA YLSTIAADVG AEVVPDAQAP TPVVVRHWFN PNLVYRWFIV PGLTGILALF SSLLITSLSI ARERELGTFD QLLVSPTSTP EIIISKSLPA LAIGTGLGLF MISAGVFLFG IPFTGSFALL LASLVLFIAS VVGIGLMISA VSMTQQQAIL GAFAVGVPAV LMSGFATPVE NMPVVLQWLA QAIPLTHFLI IVEGSFLKAM PPGDILASLW PLAIIALATL TMATVFVRGR LQ
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