Gene Tmz1t_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0839 
SymbolaroK 
ID7084696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp928216 
End bp928746 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID643697863 
Productshikimate kinase 
Protein accessionYP_002354504 
Protein GI217969270 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.657447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTGTC TGATACTGAT CGGCATGATG GGCGCCGGCA AGACCACGGT CGGCAAGGAA 
CTGGCGCGCA GGCGCAGGAT GCGCTTCGCC GATTGCGACC AGGCGATCGT GGCGCGCACC
GGCGTCAGCA TTCCGACCAT CTTCGAGCTC GAGGGCGAGG CGGGCTTCCG CCGCCGCGAG
ACGCAGATGA TCGACGAGCT CACCCGCGAG CCCGACCTCG TGCTCGCCAC GGGCGGCGGG
GTCGTCGTCA CCCCGCTCAA CCGCGAGCTG ATGCGCGAGC GCGGCATCGT CATCTACCTC
GACGTGCCGA CGCAGGTGCT GTTCGAGCGC ACCCGCCACG ACCGCAACCG CCCGCTGCTG
CAGGTCGAAA ATCCGCGCCA GCGCATCGAG GAGCTTCACC GCGCGCGCGA CCCCCTCTAT
CGCGAGACCG CCCACATCAT CCTCGCAGGC GGGCGCGGCA ACCCCTGCAA CATGGTGCGC
CAGATCGAGG AGGCGCTCGC CCGCTACAAG GCCGACACAT GCAGACCCTG A
 
Protein sequence
MSCLILIGMM GAGKTTVGKE LARRRRMRFA DCDQAIVART GVSIPTIFEL EGEAGFRRRE 
TQMIDELTRE PDLVLATGGG VVVTPLNREL MRERGIVIYL DVPTQVLFER TRHDRNRPLL
QVENPRQRIE ELHRARDPLY RETAHIILAG GRGNPCNMVR QIEEALARYK ADTCRP