Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0804 |
Symbol | |
ID | 7084196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 888309 |
End bp | 888992 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643697828 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002354469 |
Protein GI | 217969235 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATCT CGATGACTTC GACCCCGCCC GCGCCGACCA ACGACACCCG CGACCGCATC CTCGATGCAG CCGAGCGCCT TTTCGTGGAG AACGGCTTCG ACGGCACTTC GATGCGCATG ATCACCGGCG CAGCGAACGC CAACCTCGCC GCGATCAATT ACCACTTCGG CGGCAAGGAC GCGCTGGTGC AGGAGGTCTT CCGCCGCCGT CTCGCCGCCC TCAACGCGCG CCGCCTCGAC GAACTCGACC GCCTGGAGGC CGAGGCCGCG GGAGCCCCGC TCAAGCCCAG CCGCATCGTC GAGGCCTTCT TCGGCACCGC GCTGGAACTC GCCGCCGACA CCGAGCACGG CGGGCGCACC TTCATGCGCC TGCTCGCGCG TACCTACAAT GAGCCCAACG CCTTCGTGCG CCAGTTCCTC GCAGAGGAGT ACGCCGAGGT GATGGATCGC TTCCTTGGCG CGCTCTTCCG CGCCCTGCCC GAGGTGCCGC GCGCAGAGAT CCTGTGGCGC TTCCACTTCA TGATCGGTGC GATGGCCTTT GCGATCGCCG GACTCGGCGG ATTGAGCGAA TTGATGGAAG TGGGGCCGCA GGACGAGGAT CCCGCCCGGC TGCTGCCGCG CCTGATGAGT TTCCTGCTCG GCGGCCTGCG TGCGCCCCTG CCCGACGGTG GTCTGCAAGG CTGA
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Protein sequence | MLISMTSTPP APTNDTRDRI LDAAERLFVE NGFDGTSMRM ITGAANANLA AINYHFGGKD ALVQEVFRRR LAALNARRLD ELDRLEAEAA GAPLKPSRIV EAFFGTALEL AADTEHGGRT FMRLLARTYN EPNAFVRQFL AEEYAEVMDR FLGALFRALP EVPRAEILWR FHFMIGAMAF AIAGLGGLSE LMEVGPQDED PARLLPRLMS FLLGGLRAPL PDGGLQG
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