Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0785 |
Symbol | |
ID | 7084177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 869181 |
End bp | 869849 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643697809 |
Product | protein TolQ |
Protein accession | YP_002354450 |
Protein GI | 217969216 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0555571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTCA CCCACGACCT CTCCATCCTC AGCCTGATCT CCCAGGCGAG CGTCCTCGTC CAGCTCGTCA TGGCGCTGCT GGCAAGCCTG TCGCTCGTCT CCTGGTACTG GATCTTCCGC AAGGCCTTCC AGATCCGCCA GGCGCGTGCA CAGACCGACG AGTTCGAGCG CGACTTCTGG AGCGGCGGCG ACCTCAACAC CCTCTACGAG TCGGCTGGCC GCCACCAGTC CGAAGGCATG GAGCGCATCT TCGAGGCCGG CTACCGAGAG TTCACCAAGC TGCGCGGCAA GGGCCACGAC CACGGCGCCA CGCTCGACGG CGCCCGCCGC GCCATGCGCG CCACCTACCA GCGCGAGATC GACGACCTCG AGGCCCACCT CGCCTTCCTC GCCTCGGTGG GGTCGGTGTC GCCTTACATC GGCCTGCTCG GCACCGTGTG GGGGATCATG AACTCCTTCC GCGGCCTCTC CAGCGTCGGC GCCGCCACCC TCGCGCAGGT CGCGCCCGGC ATCGCCGAAG CCCTGGTCGC CACGGCGATC GGCCTGTTCG CGGCGATCCC GGCGGTGGTG GCCTACAACC GCTTCGCGCA CGACATCGAC CGCCTCGGCA TCCGCTTCGA GAGCTTCATG GAAGAGTTCT CCAACATCCT GCAACGCAAC CTGCGCTGA
|
Protein sequence | MTVTHDLSIL SLISQASVLV QLVMALLASL SLVSWYWIFR KAFQIRQARA QTDEFERDFW SGGDLNTLYE SAGRHQSEGM ERIFEAGYRE FTKLRGKGHD HGATLDGARR AMRATYQREI DDLEAHLAFL ASVGSVSPYI GLLGTVWGIM NSFRGLSSVG AATLAQVAPG IAEALVATAI GLFAAIPAVV AYNRFAHDID RLGIRFESFM EEFSNILQRN LR
|
| |