Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0784 |
Symbol | |
ID | 7084176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 868745 |
End bp | 869161 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643697808 |
Product | protein TolR |
Protein accession | YP_002354449 |
Protein GI | 217969215 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0363173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAAC GCCGTCTCAT GAACCAGATC AACGTCGTGC CCTACATTGA CGTGATGCTG GTGCTGCTGG TGATCTTCAT GGTCACCGCG CCGATGATCC AGCAGGGCAC GATCAACGTG CCCTCCGCCG GCGCCGGCAC GCCGCCGCCT CAGTCCGAGG CCATCTTCAT CGAGGTCAAG GCCGACGGGG CCTATGCGCT GCGCGCCAGC AACAGCGGGA GCTCGCGCCC GGTGCGCCGC GACCAGCTGT CGACCGCGCT CAAGGACGCC CTCGCGAAGA ACCCCGAGCA GCCCTTCCTG GTCGCCGCCG ACAGCAAGCT CGACTACCAG AAGGTGATCG ACGTGCTCGA GACCGCGCGC GACGCCGGAG TGCGCAAGAT CAGCCTGGTC ACCCAGAGCG CGACTTCGCA GAAATGA
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Protein sequence | MRQRRLMNQI NVVPYIDVML VLLVIFMVTA PMIQQGTINV PSAGAGTPPP QSEAIFIEVK ADGAYALRAS NSGSSRPVRR DQLSTALKDA LAKNPEQPFL VAADSKLDYQ KVIDVLETAR DAGVRKISLV TQSATSQK
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