| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0708 |
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| Symbol | |
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| ID | 7083937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 791368 |
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| End bp | 792822 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643697734 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_002354376 |
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| Protein GI | 217969142 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.725065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCA GCCTCCAGCT CAAGCTCTCC CAGCACCTCA CGCTGACGCC CCAGCTGCAG
CAGTCGATCA AGCTGCTGCA GCTGTCTACG ATCGAGCTGA ACCAGGAGAT CGAGCGCGTG
CTGCTCGAGA ATCCCATGCT CGAGCGCGAG GATGGCGACG GCGGCGTCGA CTACGCCCCC
GCGCCGCCGC CGGGCAACGC GCCCGAGCGC GAAGCCGCGC CGGAACCCGC CGCCGAACCG
GCGGGCGAGT CGATCACGCA CGAGGGCGGC GAAGGCAGCA GCGAGGACGA GGGCATCGAC
TGGTCCAACG TGGGTCAGGG CGCGTCCAGC CGCAGCGAGG ACGACGAGGA CGGCGACTAC
CAGGACATCC AGGCCGCCGG CGTGTCGCTG CGCGAACACC TCGACCAGCA GGTCGCCCTC
TCGCCCCTGT CCGACCGCGA CCGCGCGCTG GTGCGCTTCC TGATCGAGGC ACTCGACGAC
GACGGCTACC TGCACCAGCC GCTGGAAGAT CTCCTCGAGC TGTTGCCGCA GGACGCCGAG
GTCGATCTCG ACGAGCTCGC CATCGCCCTG CGCCACGTGC AGAGCCTCGA GCCGGCCGGG
ATCGGCGCGC GCAGCCCGCA GGAATGTCTG GCCCTGCAGC TCCAGGCCTT GCCCGAGTGC
CCGATACGCC CTCTCGCTCT CGAGATCGTG ACCAGCCACC TCGAACTGCT CGCGGAGCGC
AACTTCGCCC GTATCCGCAA GCTCACCGGC TGTGACGACG AGGGTCTGCG CGAAGCGCAG
GCCCTGATCT GCAGCCTCGA CCCCCACCCC GGCTCGCGCT ACTCCACCGC CGAGACGCGC
TACGTGCTGC CCGACGTCGT CGTGCGCAAG CTGCGCGGCC AATGGACCGT GAGCCTGAAC
CAGGAAGCGA TGCCCCGCCT GCGCATCAAC CGCCTGTACG CGAGCCTGTT GCAGCAGAAC
CGCGCACAGG GCGGCGGCCT CGGCGGGCAG CTGCAGGAGG CGCGCTGGCT GATCAAGAAC
GTCCAGCAGC GCTTCGACAC CATCCTGCGC GTGTCCCAGG CCATCGTTGA CCAGCAACGG
CAGTTCTTCG ATCATGGGGA CGTGGCGATG CGGCCACTCA CCCTAAGGGA GATCGCAGAC
CAGCTCGAGC TGCACGAATC CACCGTCTCG CGCGTCACCA CGCAGAAGTA CATGGCGACG
CCGCGCGGAG TCTTCGAGCT CAAGTATTTT TTCGGCAGTC ATGTCGCGAC CGACACCGGC
GGTGCGGCTT CCTCCACGGC GATTCGTGCG CTGATTCGCC AGCTGGTGGA CGCGGAGGAC
AGCAAGAAGC CGCTGTCCGA CGCCAAGATC GCCGAAATTC TCGGCCAACA GGGAATCGTC
GTGGCGAGGC GCACGATCGC CAAGTACCGC GAGTCCCTCA ACATCCCGCC GGTCAGCCTG
CGCAAATCCC TCTGA
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| Protein sequence | MKPSLQLKLS QHLTLTPQLQ QSIKLLQLST IELNQEIERV LLENPMLERE DGDGGVDYAP
APPPGNAPER EAAPEPAAEP AGESITHEGG EGSSEDEGID WSNVGQGASS RSEDDEDGDY
QDIQAAGVSL REHLDQQVAL SPLSDRDRAL VRFLIEALDD DGYLHQPLED LLELLPQDAE
VDLDELAIAL RHVQSLEPAG IGARSPQECL ALQLQALPEC PIRPLALEIV TSHLELLAER
NFARIRKLTG CDDEGLREAQ ALICSLDPHP GSRYSTAETR YVLPDVVVRK LRGQWTVSLN
QEAMPRLRIN RLYASLLQQN RAQGGGLGGQ LQEARWLIKN VQQRFDTILR VSQAIVDQQR
QFFDHGDVAM RPLTLREIAD QLELHESTVS RVTTQKYMAT PRGVFELKYF FGSHVATDTG
GAASSTAIRA LIRQLVDAED SKKPLSDAKI AEILGQQGIV VARRTIAKYR ESLNIPPVSL
RKSL
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