Gene Tmz1t_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0629 
Symbol 
ID7084567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp707804 
End bp708550 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID643697656 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002354298 
Protein GI217969064 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTCT TCGTCACCGG CGCCTCCGCC GGCTTCGGCG CCGCCATCGC GCGCAGCTTC 
GTCAAGGGCG GCCACCGCGT CGTCGCCACC GCACGCCGCA AGGACCGCCT GGATGCGCTC
GCCGCCGAAC TCGGCGACGC GCTGCTGGCG CTCGAGCTCG ACGTGCGCGA CGCCGATGCG
GTCGCCGCGG TGCCGGGCGT GCTGCCCGAC GGCTTCGCCG AGGTGGACGT GCTGGTCAAC
AACGCCGGCC TCGCGCTCGG CCTCGAACCT GCGCACAAAG CCTCGCTGGA AGACTGGCAC
ACCATGATCG ACACCAACTG CACCGGCCTG GTGCAGGTCA CCCGCGCCTT CCTGCCCGGC
ATGGTGGCGC GCAACCGCGG CCACATCTTC AACCTCGGCT CGGTGGCCGG ACGCTGGCCC
TATGCTGGCG GCAACGTCTA TGGCGCCACC AAGGCCTTCG TGCGCCAGTT CAGCCTCAAC
CTGCGCGCCG ACCTGCTCGG CACCGCGCTG CGCGTCACCG ACATCGAGCC CGGGCTGTGC
GGCGGTACCG AGTTCTCCAA CGTGCGCTTC CACGGCGACG ACGACAAGGC GGCCAAGGTG
TATGCCGACG TGCAGCCGCT GACCGCCGAG GACATCGCCG ACTCGGTGTA CTGGATCGCC
ACCCGGCCGG CGCACGTCAA TATCAACACC ATCGAGCTGA TGCCGGTGGC GCAGTCCTTC
GCCGGCTTGT CGGTGCATCG CGGCTGA
 
Protein sequence
MIVFVTGASA GFGAAIARSF VKGGHRVVAT ARRKDRLDAL AAELGDALLA LELDVRDADA 
VAAVPGVLPD GFAEVDVLVN NAGLALGLEP AHKASLEDWH TMIDTNCTGL VQVTRAFLPG
MVARNRGHIF NLGSVAGRWP YAGGNVYGAT KAFVRQFSLN LRADLLGTAL RVTDIEPGLC
GGTEFSNVRF HGDDDKAAKV YADVQPLTAE DIADSVYWIA TRPAHVNINT IELMPVAQSF
AGLSVHRG