Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0606 |
Symbol | metH |
ID | 7084544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 682965 |
End bp | 686663 |
Gene Length | 3699 bp |
Protein Length | 1232 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643697633 |
Product | B12-dependent methionine synthase |
Protein accession | YP_002354275 |
Protein GI | 217969041 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGCCG ACCGCAGCAT CGAACTCCGC CAGCTTCTCG CCGAGCGCAT CCTGATCCTG GACGGCGCCA TGGGCACGAT GATCCAGCAG GAGAAGCTGG GCGAGGCGGA CTACCGCGGC GAGCGCTTCC TCGACCACCC CAAGGACCTC AAGGGCAACA ACGATCTGCT GGTGCTCACG CGTCCGGACG TGGTCGCCGG TATCCATCGC GCCTACCTCG AGGCTGGCGC CGACCTCATC GAGACCAACA CCTTCAACGC CACCCGCGTG TCGCAGGCGG AGTACGGCCT GGAGGCGCTG GCCTACGAGC TCAACGTCGA GGGCGCCCGC CTGGTGCGCC GGCTGTGCGA CGAATACACC GCAAAGGACC CCGCCAGGCC GCGCTTCTGC GCCGGCGTGC TCGGGCCGAC CTCGCGCACG CTGTCGATCT CGCCCGATGT GAACGATCCC GGCTACCGCA ACATCAGCTT CGATGCGCTT GCCGACGACT ACTACGCCTC GGCGAAGGGC CTGCTCGAAG GCGGTGCCGA CATCCTGCTG ATCGAGACCA TCTTCGATAC GCTGAATGCC AAGGCGGCGG TGTTCGCGAT CGAGAAGCTG TTCGAGGACC TCGGCCGGCG CTGGCCGGTG ATGATCTCCG GCACCATCAC CGACGCCTCG GGCCGCACGC TGTCGGGCCA GACCGCGGAG GCCTTCTGGA ACTCGCTCGG CCACGCGCAG CCGATCAGCT TCGGCCTCAA CTGCGCGCTC GGCGCCGACC AGCTGCGCCA GTACGTCGAG GAACTCTCCA CCGCCTGCGA CACCCACGTG TCCGCCCACC CCAACGCCGG CCTGCCCAAC CCGCTGTCGC CCACCGGCTA CGACGAGACG CCCGAGCACC TCGCCGGCCA GATTCGCGAG TGGGCGCAGA GCGGCCTGGT GAACATCGTC GGCGGCTGCT GCGGCACCAC GCCGGCGCAC ATCGCGGCGA TCGCCGAAGC GGTCCGGGGC CTGGCGCCGC GCGCCGTGCC GGTGCTGGAG AAAAAGCTGC GCCTGTCCGG GCTGGAGCCC TTCAACGTCG GCGGCGACAG TCTTTTCGTC AACGTCGGCG AGCGCACCAA CGTCACCGGT TCCAAGGCCT TCGCGCGCAT GATCCTCGAG GGCCGCTTCG ACGACGCGCT CGCGGTGGCG CGCCAGCAGG TCGAAAACGG TGCCCAGGTC ATCGACATCA ACATGGACGA GGCGATGCTG GATTCGGTCG CCGCCATGGA GCGCTTCTGC AAGTTGATCG CCACCGAGCC CGACATCTCG CGTGTGCCGA TCATGCTCGA CTCGTCGAAG TGGTCGGTGA TCGAGGCCGG CCTCAAGTGC ATCCAGGGCA AGGGCGTGGT CAACTCGATC TCGATGAAGG AGGGCGAGGC AGAGTTCCTG CGCCAGGCGC GGCTCGCACG CCGCTATGGT GCGGCAGTGA TCGTGATGGC CTTCGACGAA AAGGGTCAGG CCGACACCTT CCGCCGCAAG ACCGAGATCT GCGAGCGCGC CTACAGGCTG CTGGTGAAGC CGGTGGCCGA GGGCGGCGCC GGCTTCCCGG CCGAGGACAT CATCTTCGAC CCCAACATCT TCGCCATCGC CACCGGCATC GAGGAGCACG ACAACTACGC GGTCGACTTC ATCAACGCGG TGGCCTGGAT CAAGGAGAAC CTGCCGTACG CCAAGACCTC GGGCGGGGTG TCGAACGTGT CCTTCAGCTT CCGCGGCAAC GACCCGGTGC GCGAGGCGAT CCACACCGTG TTCCTCTACC ACGCGATCAA GGCCGGCTTG TCGATGGGCA TCGTCAATGC CGGCCAGCTC GGCGTCTATG ACGAGCTCGC GCCCGAGCTG CGCGACAAGG TCGAGGACGT GGTGATGAAC CGCAAGCCCG GGGCGGGCGA GGCGCTGGTC GAGTTCGCGC AGACGGTGAA GGGCCAGGCC AAGGAGTCCG CGCAGGACCT CGCCTGGCGC GAGTGGGCGG TCGAGGAGCG CTTGAGCCAC GCGCTGGTCA AGGGCATCAC CGAGTTCGTC GTCGCCGATA CCGAGGAGGT GAGGGCGAAG CTGGAGGCCG CGGGCAAGCC GCCGCTGGCG GTGATCGAGG GCCCGCTGAT GGCCGGCATG AACGTGGTCG GCGACCTCTT CGGCGCGGGC AAGATGTTCC TGCCCCAGGT GGTGAAGTCG GCGCGCGTCA TGAAGCAGGC GGTGGCGCAC CTGATCCCCT ACATCGAGGC CGAGAAGCTG CGCACCGGCG CCAGCAGCAA GGGCCGTATC GTCGTCGCCA CGGTCAAGGG CGACGTGCAC GACATCGGCA AGAACATCGT CGGCGTGGTG CTCGGCTGCA ATGGCTACGA GGTGATCGAC CTCGGCGTGA TGGTGCCGGC AGCGAAGATC CTCGAGGCGG CGAAGGAGCA CGGCGCGCAG GCGATCGGCC TGTCCGGCCT GATCACGCCC TCGCTCGAGG AGATGGCCCA CGTCGCCGCC GAGATGAAGC GCCAGGGCTT TTCCGTGCCG CTGCTGATCG GCGGCGCCAC CACCAGCCGC AACCACACCG CGATCAAGAT CGCGCCGCAC TACGATCAGC CGGTGGTGTA CGTGCCCGAC GCCTCGCGTG CGGTGGGCGT GGTCACCGCG CTGCTGTCCG AAGGCCGGAG CGAGGCCTTC AAGGCCGAGG TCGCCGCCGA CTACGAGAAG ATCCGCGCGC TGCACGCCAA CAAGAAGGGC ATGCAGTTGG TGAGCCTCGA GGCTGCGCGC GCCAACGCCT TCCGCGTCGC CTCCGAATAC CAGCCGCCGC GCCCGAACAT GCTGGGCGTG CAGGCGATCG ACGTCGAGCT CGGCGAGCTG GTCGACTACA TCGACTGGGG CCCGTTCTTC CAGACCTGGG ACCTCGCCGG CCGCTTCCCC GCCATCCTCG ACGACGAAGT GGTGGGTGAG GCCGCGCGCA ACGTGTTCGC CGACGGCAAG GCGATGCTGG ACAAGATCGT CGCCGAGGAG TGGCTGCAGG CGAAGGCGGT GTTCGGCCTG TTCCCGGCCA ACGCGGTGGG CGACGACATC GAGCTCTACA CCGGCGAGGA CCGCAAGCAC CTGGCCATGG TGTGGCACGG CCTGCGTCAG CAGCACGAGC GCCCGGCGGG CAAGCCGCAC TGGTGCCTCG CGGACTTCGT CGCGCCCAAG GACTCGGGCG TGCCCGACTG GGTCGGCGCC TTCGCGGTGA CCGCCGGCCT CGGCATCGAG CCCAGGGTCG CCGCGTTCGA GGCCGCGCAC GACGACTACC ACGCGATCAT GTTGAAGAGC CTGGCCGACC GCCTCGCCGA GGCCTGCGCC GAGTGGCTGC ACGAGCGCGT GCGCCGCGAG TGCTGGGGCT ACGCCGCCGA CGAGACGCTC GACAACGCCG CGCTGATCGC CGAGCAGTAC CGCGGCATCC GCCCGGCGCC GGGCTATCCG GCCTGCCCGG ACCACACCGT CAAGGGTCCG CTGTTCGAGC TCCTCGGCGC GCGCGAGCGC ATCGGCATGG AGCTCACCGA GAGCTACGCG ATGATGCCGG CGGCGGCGGT GAGCGGCTTC TACTTCGCCC ACCCCGAGAG CCACTATTTC GCGATCTCGA AGATCGGCCG CGACCAGCTC GAGGACTGGG CGCGCCGTAC CGGCATGGAG GTCGACGAAG CCGCGCGCTG GCTGGCGCCG CTGCTCTGA
|
Protein sequence | MQADRSIELR QLLAERILIL DGAMGTMIQQ EKLGEADYRG ERFLDHPKDL KGNNDLLVLT RPDVVAGIHR AYLEAGADLI ETNTFNATRV SQAEYGLEAL AYELNVEGAR LVRRLCDEYT AKDPARPRFC AGVLGPTSRT LSISPDVNDP GYRNISFDAL ADDYYASAKG LLEGGADILL IETIFDTLNA KAAVFAIEKL FEDLGRRWPV MISGTITDAS GRTLSGQTAE AFWNSLGHAQ PISFGLNCAL GADQLRQYVE ELSTACDTHV SAHPNAGLPN PLSPTGYDET PEHLAGQIRE WAQSGLVNIV GGCCGTTPAH IAAIAEAVRG LAPRAVPVLE KKLRLSGLEP FNVGGDSLFV NVGERTNVTG SKAFARMILE GRFDDALAVA RQQVENGAQV IDINMDEAML DSVAAMERFC KLIATEPDIS RVPIMLDSSK WSVIEAGLKC IQGKGVVNSI SMKEGEAEFL RQARLARRYG AAVIVMAFDE KGQADTFRRK TEICERAYRL LVKPVAEGGA GFPAEDIIFD PNIFAIATGI EEHDNYAVDF INAVAWIKEN LPYAKTSGGV SNVSFSFRGN DPVREAIHTV FLYHAIKAGL SMGIVNAGQL GVYDELAPEL RDKVEDVVMN RKPGAGEALV EFAQTVKGQA KESAQDLAWR EWAVEERLSH ALVKGITEFV VADTEEVRAK LEAAGKPPLA VIEGPLMAGM NVVGDLFGAG KMFLPQVVKS ARVMKQAVAH LIPYIEAEKL RTGASSKGRI VVATVKGDVH DIGKNIVGVV LGCNGYEVID LGVMVPAAKI LEAAKEHGAQ AIGLSGLITP SLEEMAHVAA EMKRQGFSVP LLIGGATTSR NHTAIKIAPH YDQPVVYVPD ASRAVGVVTA LLSEGRSEAF KAEVAADYEK IRALHANKKG MQLVSLEAAR ANAFRVASEY QPPRPNMLGV QAIDVELGEL VDYIDWGPFF QTWDLAGRFP AILDDEVVGE AARNVFADGK AMLDKIVAEE WLQAKAVFGL FPANAVGDDI ELYTGEDRKH LAMVWHGLRQ QHERPAGKPH WCLADFVAPK DSGVPDWVGA FAVTAGLGIE PRVAAFEAAH DDYHAIMLKS LADRLAEACA EWLHERVRRE CWGYAADETL DNAALIAEQY RGIRPAPGYP ACPDHTVKGP LFELLGARER IGMELTESYA MMPAAAVSGF YFAHPESHYF AISKIGRDQL EDWARRTGME VDEAARWLAP LL
|
| |