Gene Tmz1t_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0566 
Symbol 
ID7085180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp639320 
End bp640153 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID643697593 
ProductABC transporter related 
Protein accessionYP_002354235 
Protein GI217969001 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAC CCGCCACCCT GCTGTCGGTG CGCAACCTGA CCATGCGTTT CGGCGGCCTC 
ACCGCGATCG ACGACCTCTC GCTGGAGGTG CCGGCGGGCA GGATCACCGG CATCATCGGC
CCCAACGGCG CCGGCAAGAC CACGCTGTTC AACTGCCTCA CCGGCTTCTA CAAGCCGACC
ACCGGCACCC TGCGCCTGGC CCACCCGACG CGTGGCGAGA TGCGCCTGGA GGCCCTGCCC
AGCCACCGCG TCGCGCGCGA CGCGCAGGTG GTGCGCACCT TCCAGAACAT CCGCCTGTTC
CCCAAGATGA CGGTGCTGGA AAACCTGATC GTCGCCCAGC ACAACGTGCT GCAGCGCGCG
TCGAAGTTCT CCATCGCCGG CCTCTTCAAG CTGCCCGGCT ACCGCCAGGC GGAGCAGCAG
GCGATCGAAC GCGCGGCGAT GTGGCTGGCG CGCCTCAAGC TCACCCACCT CGCCGACGAC
GCCGCCGGCG ACCTGCCCTA CGGTATCCAG CGCCGCATCG AGATCGCACG CGCGCTGTGC
GTCGATCCGG TGCTGCTGTG CCTGGACGAG CCGGCCGCCG GCCTCAACCC GCGCGAATCC
GCGGAGCTGA ACGAACTCCT GCTCTACCTG TGCGGCGAGA TGGGCATCGC GATCCTGCTC
ATCGAGCACG ACATGAGCGT GGTGATGAAC GTGTCCGACC ACATCGGCGT GATCAGCTAC
GGGCGCAAGA TCGCCGAGGG CACGCCGGCG CAGGTCAAGC ACGACCCGCA GGTGATCAAG
GCCTACCTGG GCGAGGACGA GGAAGAAGAA GTGACTGGAG GGGCCGCGGC ATGA
 
Protein sequence
MNTPATLLSV RNLTMRFGGL TAIDDLSLEV PAGRITGIIG PNGAGKTTLF NCLTGFYKPT 
TGTLRLAHPT RGEMRLEALP SHRVARDAQV VRTFQNIRLF PKMTVLENLI VAQHNVLQRA
SKFSIAGLFK LPGYRQAEQQ AIERAAMWLA RLKLTHLADD AAGDLPYGIQ RRIEIARALC
VDPVLLCLDE PAAGLNPRES AELNELLLYL CGEMGIAILL IEHDMSVVMN VSDHIGVISY
GRKIAEGTPA QVKHDPQVIK AYLGEDEEEE VTGGAAA