Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0548 |
Symbol | |
ID | 7085162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 616972 |
End bp | 619209 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643697575 |
Product | UvrD/REP helicase |
Protein accession | YP_002354217 |
Protein GI | 217968983 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.254513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCCCC CTATCGAGAC CCTTCCCGGG CCGAACTCCG AGCCTCGCTC CAAGACCTCC TCCCCGCGGC CGCCGGCCGC CGATCCGCTC GCGGCGCTCG ACCCCGCCCA GCGCGCCGCG GTCGGGCACG GCATCGGCGC CGATGGCCGC ATCGACGCCG GGCCGCTGCT GGTGATCGCC GGCGCCGGCT CGGGCAAGAC CGGCACGCTC GCGCACCGCG TGGCGCGCCT CGCGGCGGCC GGGGCCGATC CCGCGCGCAT CCTGCTGCTG ACCTTCTCGC GCCGCGCCGC GGACGAGATG GGCCGGCGCG TGCGTCGCAT CCTCGCGCAG GCCGCCGCCG ACCGTCCCGG CCTGGCGCGC GCCGAGCTGC AGTGGGCGGG CACCTTCCAC GCCATCGGCG CGCGCCTGCT GCGCGACCAC GCCGGCCGCA TCGGGCTCGA CCCCGGCTTC AGCATCCACG ACCGCGAGGA CTCCGCCGAC CTGATGAACC TGGTGCGCCA CGAGCTCGGG CTGTCGGCGA CGAAGCAGCG CTTCCCGCAG AAGGGCACCT GCCTGGCGAT CTATTCGGCG GTGGTCAACA CGCGCGCCGC GCTCGCCGAG GTGCTGCAGG CGAGCTTCCC GTGGTGCGCG CAGTGGGAGG ACGAGCTCAA GCGCCTGTTC CGCGCCTACG TCGAGGCCAA GCAGGCGCAG CAGGTGCTCG ACTACGACGA CCTGCTGCTG TACTGGGCGC AGATGGTGGG CGAGGCGGAG CTCGGTGCCG AAATCGGCGG CCTCTTCGAC CACGTGCTGG TCGACGAATA CCAGGACACC AACGCGCTGC AGGCGGCGAT CCTGCTCGCG ATGAAACCGG ACGGCCGCGG CCTGACCGTG GTCGGCGACG ACGCGCAGTC GATCTACGCC TTCCGCGGCG CCACGGTGCG CAACATCCTC GACTTCCCGG CGGCCTTCGA GCCGCCGGCG CGGGTGGTGA CGCTGGAGCG CAACTACCGC TCCACCCAGC CCATCCTCGA CGCCGCCAAC GCGGTGATCG CGCTCGCCGC CGAGCGCTTC GCCAAGAACC TGTGGAGCGA GCGCGCCTCG GCGCAGCGCC CGCGCCTGGT GACGGTGAAG GACGAGGCGG CGCAGGCCGA CTTCGTGGTC GACAGCGTGC TGGCGCGCCG CGAGGAAGGG CTGAAGCTCA AGCAGCAGGC GGTGCTGTTC CGCGCCTCGG CGCACAGCGC GCGCCTGGAA CTGGAGCTGA CCCGGCGCAA CATCCCCTTC GTGAAGTACG GCGGGCTCAG GTTCCTCGAG GCCGCCCACG TCAAGGACGT GCTCGCGCTC CTGCGCTGGG CGGAGAACCC GCGCGACCGC ATCGCCGGCT TCCGTGCCAT CCAGCTGCTC GCCGGCATCG GCCCCAGGAC TGCCGGGCGC GTGCTCGACA ACGTCTGCAG CGCGCCGCCG GGCTGCGTGC TGCTCGCCGA GCAGCCGGTG CCGGAGGCGG CGCGCCCGGG GTGGCTGGAG TTCGCCACGC TGGTCGACCG GCTTTCCGGG CGGGAGGAGG CCTCGACCGC CGCATTCGCG CCTGGCGGCG CTCCTGCACG AACCACCGCG CCTGTCCGTG CGGAGGGTCT TGCGGGCGGG GCGAGGGGCG GCCTGCCGTG GCCGACCGAC TTCGAGCTCG CCTGCCGTTG GTACGAGGCG CAGATGCCGC GCCTGTACGA CGATTTCCAG GTGCGCGTGC TCGACATCCA GCAGCTCGCG CGCATCGCCG CCACCAGCCC GAGCCGGCAG CGCTTTCTCA CCGAACTCAC GCTCGATCCG CCCAGCGCCA CCAGCGCCGA GGCCGGCATG CCGCTGCTCG ACGAGGACTA CCTGATCCTG TCGACCATCC ACTCGGCCAA GGGCCAGGAG TGGAACGCGG TGAGCGTGCT CAACGTGGTC GACGGCTGCA TCCCTTCGGA CGTCGCCACG CGCGACAGCG CCGAGATCGA GGAAGAGCGC CGCCTGCTCT ATGTGGCGAT GACGCGCGCG AAGGACGCCC TCGACCTGAT CGTGCCGCAG CGCTTCCACG TCACCCAGCA GACGGGCCTG GGCGATCGCC ATGTCTATGC CGGGCGCAGC CGCTTCATCC CCAACCGTCT GCTCGGGCAC TTCGAGCAGA TGAGCTGGCC GTTGCCTGCG CCCGAACTCC AGGGCTCGCC GGCCTCGCGC CAGGCGGCGA TCGACCTCGC CGCGAAGATG CGCGACATGT GGCGATGA
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Protein sequence | MSPPIETLPG PNSEPRSKTS SPRPPAADPL AALDPAQRAA VGHGIGADGR IDAGPLLVIA GAGSGKTGTL AHRVARLAAA GADPARILLL TFSRRAADEM GRRVRRILAQ AAADRPGLAR AELQWAGTFH AIGARLLRDH AGRIGLDPGF SIHDREDSAD LMNLVRHELG LSATKQRFPQ KGTCLAIYSA VVNTRAALAE VLQASFPWCA QWEDELKRLF RAYVEAKQAQ QVLDYDDLLL YWAQMVGEAE LGAEIGGLFD HVLVDEYQDT NALQAAILLA MKPDGRGLTV VGDDAQSIYA FRGATVRNIL DFPAAFEPPA RVVTLERNYR STQPILDAAN AVIALAAERF AKNLWSERAS AQRPRLVTVK DEAAQADFVV DSVLARREEG LKLKQQAVLF RASAHSARLE LELTRRNIPF VKYGGLRFLE AAHVKDVLAL LRWAENPRDR IAGFRAIQLL AGIGPRTAGR VLDNVCSAPP GCVLLAEQPV PEAARPGWLE FATLVDRLSG REEASTAAFA PGGAPARTTA PVRAEGLAGG ARGGLPWPTD FELACRWYEA QMPRLYDDFQ VRVLDIQQLA RIAATSPSRQ RFLTELTLDP PSATSAEAGM PLLDEDYLIL STIHSAKGQE WNAVSVLNVV DGCIPSDVAT RDSAEIEEER RLLYVAMTRA KDALDLIVPQ RFHVTQQTGL GDRHVYAGRS RFIPNRLLGH FEQMSWPLPA PELQGSPASR QAAIDLAAKM RDMWR
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