Gene Tmz1t_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0535 
Symbol 
ID7085149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp603484 
End bp604500 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content77% 
IMG OID643697562 
Productesterase, PHB depolymerase family 
Protein accessionYP_002354204 
Protein GI217968970 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.660761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAGCC GCCGCGTCCG CCCTTCGCCC CTGTTGCGTG CCATCGAGCG CGCCACCACC 
GCGATGACCC GGCGCGCGCT CCGCGCCGGC GCGGACGCCG CCGGCAAGGC CGCGGCGCGC
GGCGTCGAGG CGATGTCCGC GCCCTACCGC CTGCCGGTGT CGGCCGGCGA CTGGATCCCC
GGGCAGGCGA TCGGGCCGGC GGGCCTGCGC CGCTTCCGGC TGTTCCGCCC GGCAGACGTG
CGCAGCAGCG ATCGCCTGCC GCTGCTGGTG ATGCTGCACG GCTGCGGCCA GAACGCCGCG
GCCTTCGCGC GCAGCACGCG CATGGACCGG CTCGCCGCGC GCGAGCGCTT CCTGGTGCTC
TATCCCGAGC AGGACCTGGC CGCCAATCCG CAGGGCTGCT GGAACTGGTA CGACACGCGC
AGCCATCGCG CCGAGGCCGA GGCGGCGACT CTGATCGCGG CGATCGACCA GGCCTGCCTG
CTCTACCCGG TCGACCGCGA CGCGGTGGCG GTGGCCGGCT TGTCGGCGGG GGCGAGCATG
GCGGCCCTGC TCGCGGTGCG CTGGCCGGAG CGCTTCTGCG CGGTCGCGAT GCACGCTGGT
GTCGCGCCGG GCGCGGCAAA CTCGGCGGCC GGGGTGCTGG CCGCGATGCG CGGCCGCAGC
CTGCCCCCGA CCGCGGTCGA GCGCGGGAAC CGGCCGCCGC TGCTGGTGAT CCACGGCAGC
GAGGACCGCG TGGTGTCGGT TCGCAACGCC CACGCCGCCG CTGAGCAGTG GGCCGCCGCG
CTCGGCGCGC GCGCCGCCGA TCCGCGCCGG GTGCAGCGCG GGGCGCGCCA CGCGATGACG
GTGACCGACT GGCGTGTGCG GCGCCGGGTG TGCGTCCGCC TGTGCGAGGT CGAGCGCCTC
GGCCATGCCT GGAGCGGCGG CGCCGCCGGC GAGCACTTCA GCGACCCGCA GGGGCCGGAT
GCATCGACGC TGATCTGGCG CTTCGTGCAG GGGAGCCTGC TTGGGCCTGA GGCGTGA
 
Protein sequence
MVSRRVRPSP LLRAIERATT AMTRRALRAG ADAAGKAAAR GVEAMSAPYR LPVSAGDWIP 
GQAIGPAGLR RFRLFRPADV RSSDRLPLLV MLHGCGQNAA AFARSTRMDR LAARERFLVL
YPEQDLAANP QGCWNWYDTR SHRAEAEAAT LIAAIDQACL LYPVDRDAVA VAGLSAGASM
AALLAVRWPE RFCAVAMHAG VAPGAANSAA GVLAAMRGRS LPPTAVERGN RPPLLVIHGS
EDRVVSVRNA HAAAEQWAAA LGARAADPRR VQRGARHAMT VTDWRVRRRV CVRLCEVERL
GHAWSGGAAG EHFSDPQGPD ASTLIWRFVQ GSLLGPEA