Gene Tmz1t_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0529 
Symbol 
ID7085143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp594852 
End bp596108 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content66% 
IMG OID643697556 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_002354198 
Protein GI217968964 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.606906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA ATCCCGCAAC TGCCGTCGAA CAGAGCGGCA AGCCCCAATC CCCGGCGCGC 
GAGCGCTTCC TCGCCCATCT GCACGGTGTC GTCGATCAGA TCCGCGCCGA CGGCTTCTAC
AAGGCCGAGC GCGTCATCGA CAGCCCTCAG GGTGCCCAGG TCCACCTCGG CACCGGTGCG
GACGTCCTCA ACTTCTGCGC CAACAACTAC CTCGGGCTCG CCAACGACCC GCGCCTGGTC
AAGGCCGCCC AGGACGGCCT GGCCGAGGAC GGCTTCGGCA TGGCGTCGGT GCGCTTCATC
TGCGGCACGC AGTCGGTGCA CAAGCAGCTC GAGGCGAGCA TCTCGAAGTT TCTCGGCACC
GAGGACACCA TCCTGTACGG CAGCTGCTTC GACGCCAACG GCGGCCTGTT CGAGACCCTG
CTCACCGAAG AGGACGCGGT CATCTCCGAC GAGCTCAACC ACGCCTCCAT CATCGACGGC
GTGCGCCTGT GCAAGGCCAG GCGCTACCGC TACCGCAACA ACGACATGGC CGACCTCGAG
GCGCAGCTGC AGGCCGCGGA CGCCGCCGGC GTGCGCTTCA AGCTGATCGC CACCGACGGC
GTGTTCTCCA TGGACGGCGT GATCGCCGAC CTGAAGTCGG TCTGCGACCT GGCCGACAAA
TATGGCGCGC TGGTGATGGT CGACGACTCC CATGCCGTCG GCTTCGTCGG CACGCACGGC
CGTGGAACGG CGGAATACTG CGGCGTGGAA GGCCGCGTGG ACATCATCAC CGGCACGCTC
GGCAAGGCGC TGGGGGGCTC CTCGGGAGGC TATACCTCGG GGCACAAGGA GATCATCGAA
CTGCTGCGCC AGCGCTCGCG GCCCTATCTG TTCTCCAACA CGCTCGCGCC CTCCATCGCC
GCGGCCTCGA TCAAGGTGAT GGAGCTGCTC GCGAGTGAAG AAGGTCTTGA ACTGTGCCGT
CGCGTCAAGG AAAACGGCGA ACATTTCCGC CGCGAGATGA CCAAGCTCGG CTTCACGCTG
GCGGGCAAGG ATCACCCCAT CGTCCCGGTC ATGCTCGGCG ATGCGCAGCT GGCCGGTCGC
ATGGCCGAAG AGCTGCTGAA GGAAGGCATC TACGTCATCG GCTTCTCCTT CCCCGTCGTG
CCCAAGGGCA AGGCCCGCAT CCGCACGCAG ATGAGCGCCG CGCACACCAC GGCGCAGATC
GACCGCGCGG TGGCGGCCTT CGCCAAGGTG GGCAAGGCAC TCGGCGCGAT TGCGTGA
 
Protein sequence
MNKNPATAVE QSGKPQSPAR ERFLAHLHGV VDQIRADGFY KAERVIDSPQ GAQVHLGTGA 
DVLNFCANNY LGLANDPRLV KAAQDGLAED GFGMASVRFI CGTQSVHKQL EASISKFLGT
EDTILYGSCF DANGGLFETL LTEEDAVISD ELNHASIIDG VRLCKARRYR YRNNDMADLE
AQLQAADAAG VRFKLIATDG VFSMDGVIAD LKSVCDLADK YGALVMVDDS HAVGFVGTHG
RGTAEYCGVE GRVDIITGTL GKALGGSSGG YTSGHKEIIE LLRQRSRPYL FSNTLAPSIA
AASIKVMELL ASEEGLELCR RVKENGEHFR REMTKLGFTL AGKDHPIVPV MLGDAQLAGR
MAEELLKEGI YVIGFSFPVV PKGKARIRTQ MSAAHTTAQI DRAVAAFAKV GKALGAIA