| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0498 |
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| Symbol | |
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| ID | 7085009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 559939 |
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| End bp | 560970 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643697527 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_002354169 |
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| Protein GI | 217968935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.962606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAC GCCGCTTCAC CGCCCTCATC GCCGGCCTGT TCGCCTCGAC CGCGCTCGGT
TTCTCGATGC CGGCCACGGC CCAGCAGTAC AAGGACGAGT ACAAGCTCTC CACGGTGCTC
GGCGAGGCCT TCCCGTGGGG CTGGGGCGCC AAGCGCTGGG CCGACCTGGT CGCAGAGAAG
ACCGAAGGTC GCATCAAGAT CAAGGTGTAT CCGGGCACTT CGCTGGTGTC GGGCGACCAG
ACCAAGGAAT TCACCGCGCT GCGCCAGGGC ATCATCGACA TGGCGGTCGG TTCCACGATC
AACTGGTCGC CGCAGGTCAA GGAGCTCAAC CTGTTCGCGC TGCCCTTCCT GATGCCCGAC
CACAAGGCGA TCGACGCGCT CACCCAGGGC CGCGTCGGCA AGAAGATGTT CGACATCCTC
GCCGAGCGCG ACGTGGTGCC GCTGGCCTGG GGCGAGAACG GTTTCCGCGA GGTCTCCAAC
TCGAAGAAGC CGATCCGCAC GCCCGAGGAC GTCAAGGGCA TGAAGATGCG CGTGGTCGGT
TCCCCGCTCT TCCTCGCCAC CTTCAACGCG CTCGGCGCCA ACCCGACGCA GATGAGCTGG
GCCGACGCCC AGCCGGCGAT GGCGACCGGC GCGGTCGACG GCCAGGAGAA CCCGCTCGCG
GTGTTCAACG CCGCCAAGCT GCACACCGTG GGGCAGAAGA ACCTGACCCT GTGGGGCTAC
GTCGCCGACC CGCTGATCTT CGTGGTGAAC AAGTCCGTGT GGAACTCGTG GTCCGAGGCC
GACCGCAAGG CCGTGTCCGA GGCCGCGCAG CAGGCTGCGA AGGAAGAGAT CGCGCGCGCG
CGCGCCGGCA TCTCGGCGGC CGACGACGCG CTGCTGAAGG AGATCGAGGC CAACGGCGTG
GCCGTGGTGC GCCTGACCGA TGCCGAGCGC GACGCCTTCC GCCAGGCCAC CGCGGGCGTG
TACAAGGAGT GGGCCGAGAA GATCGGCGCC GACCTCGTCA AGCAGGCCGA GGAAGACATC
GCCAAGCGCT GA
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| Protein sequence | MQKRRFTALI AGLFASTALG FSMPATAQQY KDEYKLSTVL GEAFPWGWGA KRWADLVAEK
TEGRIKIKVY PGTSLVSGDQ TKEFTALRQG IIDMAVGSTI NWSPQVKELN LFALPFLMPD
HKAIDALTQG RVGKKMFDIL AERDVVPLAW GENGFREVSN SKKPIRTPED VKGMKMRVVG
SPLFLATFNA LGANPTQMSW ADAQPAMATG AVDGQENPLA VFNAAKLHTV GQKNLTLWGY
VADPLIFVVN KSVWNSWSEA DRKAVSEAAQ QAAKEEIARA RAGISAADDA LLKEIEANGV
AVVRLTDAER DAFRQATAGV YKEWAEKIGA DLVKQAEEDI AKR
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