Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0424 |
Symbol | |
ID | 7084935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 484397 |
End bp | 485503 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643697456 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_002354099 |
Protein GI | 217968865 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGG TCCATAACAG CCAGGCACCC CATGTAAGCT TTCGCAACGT CCAGAAGACC TACGACGGCG AAACCCTCAT CGTGCGGGAC CTCAATCTCG ACATTCGCCG CGGCGAGTTC CTCACCCTGC TCGGACCGTC CGGCTCGGGC AAGACCACCT GCCTGATGAT GCTGGCCGGC TTCGAGACCC CCACCGGCGG CGAGATCCGC CTCGATGGCG AGGTCATCAA CCGGGTGCCG CCCTATCGTC GCAACATCGG CATGGTGTTC CAGAACTATG CGCTGTTTCC GCACATGACG GTGGCCGACA ACCTGCGCTT TCCGCTGCGC GTGCGCAAGC TGGCGGCCAA CGAGGTCGAG GCGCGGGTGA AGCGCGCGCT CGGCATGGTG CAGCTCGAGG CCTTCGGCAG CCGCTATCCG CAGCAGCTCT CGGGCGGCCA GCAGCAGCGC ATCGCGCTCG CCCGTGCGCT CGTGTTCGAT CCACAGCTGG TGCTGATGGA CGAGCCGCTC GGCGCGCTCG ACAAGAATCT GCGCGAGCGC ATGCAGCTCG AGATCAAGCA CATCCAGCAG AACCTCGGCA TCACCGTGGT GTTCGTCACC CACGACCAGA GCGAGGCGCT GACCATGTCG GACCGCATCG CCGTGTTCAA CCACGGCGTG ATCCAGCAGA TCGACGCCCC CGAGGCGCTG TACGAATACC CGACGAATTC CTTCGTCGCC GACTTCATCG GCGAGAACAA CGCGCTGGAC GGCACCGTGG TGGCCGTGGC GGGCGAGGAG TGCGACGTGC GCCTCGACTG CGGCACGGTG CTGCGCGCGC GCACCGGCAA CGTCGGTGCC GGCGGCCGCG CCCGCATCGC GGTGCGTCCG GAGCGCGTAC AGCTCGCCGG CGAGGGCGAG GGCGCCAACC GGCTCGACGC CACCGTCCGC GAGCTGATCT ACCTCGGCGA CCAGATCCGC CTGCGCGTCG AGCTCGCCGG CAAGCACGAG TTCACCATCA AGGCGCCGAT CTCGCAGCTC GACCGCTCGC TGCGCCCCGG CGACGCGATC CGCGTCGGGC TCGATCCGGC GCACACGCGG GCGCTCGACG TGCCCGCGGC GCACTGA
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Protein sequence | MEAVHNSQAP HVSFRNVQKT YDGETLIVRD LNLDIRRGEF LTLLGPSGSG KTTCLMMLAG FETPTGGEIR LDGEVINRVP PYRRNIGMVF QNYALFPHMT VADNLRFPLR VRKLAANEVE ARVKRALGMV QLEAFGSRYP QQLSGGQQQR IALARALVFD PQLVLMDEPL GALDKNLRER MQLEIKHIQQ NLGITVVFVT HDQSEALTMS DRIAVFNHGV IQQIDAPEAL YEYPTNSFVA DFIGENNALD GTVVAVAGEE CDVRLDCGTV LRARTGNVGA GGRARIAVRP ERVQLAGEGE GANRLDATVR ELIYLGDQIR LRVELAGKHE FTIKAPISQL DRSLRPGDAI RVGLDPAHTR ALDVPAAH
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