Gene Tmz1t_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0272 
Symbol 
ID7085573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp308518 
End bp309594 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content62% 
IMG OID643697313 
ProductNa+/Ca+ antiporter, CaCA family 
Protein accessionYP_002353961 
Protein GI217968727 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTC TCTTGTTCCT CGGCGGCCTG ACCTTGCTGG TTATCGGCGC CGACATCCTG 
GTTCGCGGTG CGTCCAAGCT GGCGATGTCC GTCGGTATCA GCCCGCTTGT CGTCGGGCTC
ACCATCGTTG CCTTTGGCAC TAGCGCGCCC GAGGTTGCGG TGAGCGTTGG CGCCATCCTC
GACGGCAAGA CCGACATTGC CATCGGCAAC GTGGTGGGCA GCAACATCTT CAATGTGCTG
TTCATCTTGG GCATCAGTGC CCTGATCACG CCGCTGGTAG TCAACATCCA GTTGATCCGG
CAGGAGGTGC CGATCATGCT GGGCGCAAGC CTGTTGCTGC TGGCGCTCAC TCTGGATGGC
AGGCTCTCGT TCCTTGACGG GGGCTTCCTG TTTGCCCTGC TGTTGGCCTA CACCGTATTC
TTGGTCGTGC AATCGCGGCG CGAGACCCAA GCCGCAAAGG ACGAGTTTGC CGAAGAGATC
AAGCCAGCTC AGACCGGAGC CTGGGACAGC CACTGGGCTG TGCAGATAGG ATTGATCGCT
GCGGGTCTGG TGGCGCTGGT CTTCGGCTCG GACTACCTGG TCCAGGCTTC GGTGAACTTT
GCCAAGGCCA TGGGTGTGAG CGACCTCGTC ATCGGCCTGA CGATCGTCGC CGCCGGCACC
AGCATGCCTG AGGTGGCTAC CAGCATCACA GCCGCGATCA AGGGCGAACG CGATATCGCG
GTGGGGAACG TCGTCGGCAG CAACACCTTC AACATCCTGG GCTGCCTGGG CTTGTCGGGG
CTGGTGTCGG GCGACCTGGG CCTGGCGATG GCGCCATCGC TGCTGGCCTT CGATATCTGG
GTGATGTTGG CGGTGGCCCT GGCCTGCCTG CCGGTGTTCA TGACCGGTCG CGAGATCGCG
CGCTGGGAAG GCGGCGTCTT TTTGGGTTAC TACATCGCCT ACGTGGCCTA CCTGCTTCTG
GCGGCGCAGC AGCATGATGT GCTGCCGGTC TTCTCGAGCG TGATGATGAG CTTTGTCGTA
CCGCTGACCG TGGTGACCCT GGTGGTGGTG GTGATCCGCC GTCCGTCCGC AACATGA
 
Protein sequence
MNLLLFLGGL TLLVIGADIL VRGASKLAMS VGISPLVVGL TIVAFGTSAP EVAVSVGAIL 
DGKTDIAIGN VVGSNIFNVL FILGISALIT PLVVNIQLIR QEVPIMLGAS LLLLALTLDG
RLSFLDGGFL FALLLAYTVF LVVQSRRETQ AAKDEFAEEI KPAQTGAWDS HWAVQIGLIA
AGLVALVFGS DYLVQASVNF AKAMGVSDLV IGLTIVAAGT SMPEVATSIT AAIKGERDIA
VGNVVGSNTF NILGCLGLSG LVSGDLGLAM APSLLAFDIW VMLAVALACL PVFMTGREIA
RWEGGVFLGY YIAYVAYLLL AAQQHDVLPV FSSVMMSFVV PLTVVTLVVV VIRRPSAT