Gene Tmz1t_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0246 
Symbol 
ID7084367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp281307 
End bp281954 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID643697288 
Productpentapeptide repeat protein 
Protein accessionYP_002353937 
Protein GI217968703 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.858337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACGA TCCGCGCCAC ACTGCACGCC ACCCTCGCGG CCAGCCTGCT GCTCGCCCTG 
CTCCCGCCCG CCCACGCCCA GCGCGCCGGC AACATCGGCG GCTGCGACAT CCGCCGCGGC 
ACGCTGTGCA CCAACCTCAA CCTCAACGGG GCAAACCTCG AAGGGGTGAA TCTGGCCAAC 
TCGCAGTTCA CCCGCTCGGA TCTGTCCGGC GCCAACCTGC GCGGCGCCAC CTTGAACGAA 
GCCAACTTCT CCCAGGCCGA GATGGCAGGC GCGACGCTGG ACAAGGCCTC GATGCTGCGC 
GCCAACCTGC GTGGCGCACG CCTGACCGGC GCCAGCTTCA AGGAAGCCGA CCTGCGCAAC 
GCCATCCTGC AGAACGCCGA CCTGCACGAC GCCGATCTCA CCGCCGCCCA GCTCGGCGGC 
GCCGACCTGA CCAACGCCCG CGCCGAGCGC AGCCGCTTCG ATGGCGCCGA GCTCACCCGC 
AGCAACCTGC GCGCCGCCAA GCTCGCGGGC GCGTCCTTTG TCGGCGCCAA CCTGCTGGGG 
GCGAACTTCA CCCGCGCCCA GCTCAGCAAC GCGGACCTCA CCGGTGCGAA CCTGGATCAG 
GCGATCTTCC TCAACGCGCA GACGGACGGG TGCAAGGGCT GTCCGTAG
 
Protein sequence
MPTIRATLHA TLAASLLLAL LPPAHAQRAG NIGGCDIRRG TLCTNLNLNG ANLEGVNLAN 
SQFTRSDLSG ANLRGATLNE ANFSQAEMAG ATLDKASMLR ANLRGARLTG ASFKEADLRN 
AILQNADLHD ADLTAAQLGG ADLTNARAER SRFDGAELTR SNLRAAKLAG ASFVGANLLG 
ANFTRAQLSN ADLTGANLDQ AIFLNAQTDG CKGCP