Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0238 |
Symbol | |
ID | 7084359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 272575 |
End bp | 273096 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643697280 |
Product | rod shape-determining protein MreD |
Protein accession | YP_002353929 |
Protein GI | 217968695 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCCCA CCAACCGTTC CAGCCGCATC CTGCAGCCGG TCAAGCTGTG GTTCGTCTAC CTGAGCCTGT TCGTCGCGCT CGGCCTGGAG TACATCCCCA CCGGACGCAC GCCCGGCCTG CCCGACTGGG TAGCGCTGGC GTTGGCCTTC TGGTGCGTGC GCGAGCCGCT CGCGATCGGC ATGGGCGCGG GTTTCGCCTT CGGCCTGCTG ATGGACGTCG GCCTCGGCGC GGCGATGGGG CAGCACGCGC TCGCCTATGT CGTGCTGGCT TATCTGGCCA ACGCGCTCGC CCGCCGCGTG CTGTGGTTCC CCGCCTGGCA GCAGGCGCTG CACGTGTTGC CCCTGCTGCT GCTGGCGCAG GCGATCATGG CGCTGGTGCG CCTGGTGGCG GGGGCGGAGT TCCCCGGGTG GGCGTATTTC CTGTCGAGCT TCGGCAGCGC GCTGCTGTGG ACGCCGCTGT CCTTCCTGCT GCTGCTGCCG CAGTACCAGC CGGACGAGCG CGATGACAAT CGCCCGATCT GA
|
Protein sequence | MHPTNRSSRI LQPVKLWFVY LSLFVALGLE YIPTGRTPGL PDWVALALAF WCVREPLAIG MGAGFAFGLL MDVGLGAAMG QHALAYVVLA YLANALARRV LWFPAWQQAL HVLPLLLLAQ AIMALVRLVA GAEFPGWAYF LSSFGSALLW TPLSFLLLLP QYQPDERDDN RPI
|
| |