Gene Tmz1t_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0168 
Symbol 
ID7085265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp192990 
End bp196322 
Gene Length3333 bp 
Protein Length1110 aa 
Translation table11 
GC content72% 
IMG OID643697210 
Productpotassium efflux protein KefA 
Protein accessionYP_002353859 
Protein GI217968625 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCGC TGATCCGAGT CTTCCTCCTG CTCCTGTTTA CGCTGCTGGC CCCCTGGGCC 
GCCGCCGAAG CGCCGCCACG GCCGCAGCCG GACGAGCTGC GCGCGCGCGC GCAGGCGCTC
GCGGACCGCA AGCTGCCCGA GGCCGAGCAA CGCGCCGCGC AGCAGGCGCT GGAACAGGCC
CAGGCCAGCC TCGCCAGCGC CGATGACCAT CGCCGCCGGC TCGATTCGCT CAAGCAGACA
CTCGCCGACG CACCGGCACA GATCGCCGAG GCGCGTCGCC AGCTCGCCGC GCTGCCCGCG
GCCGCGCCGG TCGCGGCGCC CGCCGCCGAC ACCCCGCTCG CCCGCCTCGA GGAGCGCCTC
GCCGAACAGG AGGCCGCGCT CGCCGACTGG CGCCGCCGCC TCGACGAGGC CGACAGCCTG
CTCGTCGCCG CGCGCACCGG CCCCGAGCGC GCACAGACCG AGATCAGCAC CGGCCAGGTG
CGCATGGCGG CGATCGAGGC CATGCTCGCG AGCGGACGCG AAGCCGGGCG CGACAGCCGC
GCGCTCAGCC CGGAGCGCCG CGACGCGCTC GCCGCCGAAT GGCATGCGCT CGACGCCCAG
CTCGCGCTGC GCCGCCAGGA GCTCGCCGGC AACAGCGGCC TGATCGACCT CGGCCTCGCC
CGCCAGGAGC TCGCGCGCCT GCAGCTCGCC CGCCTCGAGG AGGCGGCACG CGCGCTGCAG
GACGCGATCA GCCGCCAGCG CGCCAGCCAG GCCGAGCAGA CCGTGCAGGC GCTCGCCGAC
GTAAGTGCCG ACGCGAGCCA CGACGACCTC CTCGCCCGCG AGGCGGCGAT CAACCAGCAG
CTGTCCGAAT ACCTGCTGGG CGCCACCGAG AAGCTCGACG CCCTCACCCG GCGCAACCAG
GCGGTAAGCC AGCAACTCGA CATGCTCAAC CGCAGCACCA CGCTGATCGA CGAGCAGATC
GGCGTGCTTC AGGGCAGCGT CCTGCTCTCG CGCATCCTGC TCGAGCAGCG CCGGGCGCTG
CCCGCCCCGA CGACCGACGC CGGCCTCGCC GACCAGATCG CCGACATCCG CCTGTACCAG
TTCGAGATCA ACAAGCAGCG CGAACAGCTC TCCATCCCGG CCGCCCACGC CGAACGCCTG
CTCGCCGACG CCGGCGAGGC CGACCCGGCC GTGCGCGAAC CGCTGCTGGC GCTGCTCGCC
ACCCGCAGCG AGCTGCTCGA GCGCCTCAAC CGCGAGCTCA ACGCGGTGCT CGCCCAGTCG
ATCACGCTGC AGCTCGCCGA GCGCCAGCTG CTGGTGAGCG CCGACCGCCT GCGCGCCACG
CTCGACAAGC AGATGTTCTG GATCCCGAGC AACCGCCCGC TCGACCTCGC CTGGCTGCAG
GCGGTGCCGG CCGCGCTCGC CAAGCAGTTC GCCGCGATCC CGTGGGGCTC GGCCGTCGGC
GAGCTGTGGG CGGGCCTGCA GGCGCGGCCC TTCCTGTTCC TGCCGGTGTT GCTGTTGAGC
GTCGGCCTGT TCGCGCGCCG GCGCTGGCTG CGCGCGCAGC TCGACAGCCT GCATGCGGAC
ATCGGCTACG TGCGCCGCGA CAGCCAGCTC CACACCCCGC GCGCGATCCT GCTCAACATG
CTGCTGACCT TGCCGGTAAG CCTGCTGCTG GCGCTCGGCG GCATCGCCCT GCAGATGGAC
GCGCGCGGCC AGAACGCGGC CCTGGGCGCG GCGCTGATGG ACATGGCACA GGCCTGGCTG
GTGTTCCGCA CCGCCCATCG CCTACTCACG CCGGGCGGGG TGGCCGAACG CCACTTCCAG
TGGCCCGTCG AGCGCGTGCG CGCACTGCAC CGCAACCTGA ACAAGCTCGG TCTGGTGGTG
GTGGCGGTGG TCGCGGTGGT GGCGATCGCG GAGCGCCAGC CCGAGAGCCT GGGCATCGAC
GTGCTGGGCA TCCTGATCCT GCTCGTCGGC TACGCCACCA TGGCCTGGCT GCTGGTGCGC
GGCCTGCTGC ACACGCGCCT GGAAGACCGC CCCTCCCCGT TGCGCGTGTT CGTGGGGCTG
GCGCTCGGCC TCATGCCGCT CGCGCTGATC GGCGCGCTGG TGATGGGCTA CTACTACACC
GCGCTCAAGC TCACCGGCCG CCTGGTGGAC ACCCTGTACG TGCTGATCCT GTGGCGACTC
GCCGAAGGCC TGCTGGTGCG CGCGCTCGGC GTCGCCGCGC ACCGCATCGA CCATCAGCGC
GCGGTCGCGC GCCGCGAGGC CGCCGAGCGC GAGGGCCGCG CCGGCGCCGA CAGCGAGCCG
GCTGCGGTGG CCGAGGCGCC GATGCTCGAC ATCGCCCGCA TCAACCAGCA GTCGCTGCGC
CTGCTCCACC TGGCCCTGCT GTCCGGCCTC GCGGTGGCGC TTTACTGGGT GTGGGCCGAC
CTGCTGACGG TGGTGTCCTA CCTCGACAAC ATCACCCTGT ACGAGTACGC CAGCGGCAGT
GGCGAGACCG CCGGCGTGGT GCCGATCAGT CTCGCCGACC TGCTCGGCGC GCTGGCGATC
GCGGCGATCG CCTTCATGCT CGCCACCAAC CTGCCGGGCC TGCTCGAGGT GCTGGTGCTG
TCGCGGCTCC AGCTCGCCCA GGGCAGCGCG TATGCGATCA CCACGCTGCT CTCCTACGTC
ATCGTCGGCG TCGGCATCGC TTCCACGCTG GGCACCCTGG GGGTGAGCTG GGACAAGCTG
CAGTGGCTGG TGGCGGCGCT GTCGGTGGGC CTGGGCTTCG GCCTGCAGGA GATCTTCGCC
AACTTCGTCT CCGGTCTGAT CATCCTGTTC GAGCGCCCGC TGCGCATCGG CGACGTGGTG
ACGATCGGCA ACGTCTCGGG GACGGTGAGC CGCATCCAGA TCCGCGCCAC CACGATCACC
GACTTCGACC GCAAGGAGAT GATCGTGCCC AACAAGGCCT TCATCACCGG CCAGCTCACC
AACTGGTCGC TGACCGACAC GGTGACGCGG GTGACGATCA AGCTCGGCGT GGCCTACGGC
GCCGACCTGG AGACGACGCG GCGCCTGCTG CTCGCGATCG CGGCCGAAAA CGCGCGCGTG
CTGAAGGATC CGGAACCGCT GGTGTTCTTC CTCAACTTCG GCCCCAGCAC GCTCGACCAC
GAGCTCCGGG TGCACGTGCG CGAACTCGGC GACCGCAACG CCGCGATCGA CGAGATCAAC
CGCGAGATCG ACCGCCGCTT CCGTGAAGCG GGAATCGAGA TCGCCTTCAA CCAGATGGAT
GTGCACATCC GCAGCATCGC CGACGGCCGC GAGGCCTTGC TGCAGCAAAC GGCGGTGACT
CCGCCCGCCG GTTCACCGGG TCAACAAGGA TAG
 
Protein sequence
MRPLIRVFLL LLFTLLAPWA AAEAPPRPQP DELRARAQAL ADRKLPEAEQ RAAQQALEQA 
QASLASADDH RRRLDSLKQT LADAPAQIAE ARRQLAALPA AAPVAAPAAD TPLARLEERL
AEQEAALADW RRRLDEADSL LVAARTGPER AQTEISTGQV RMAAIEAMLA SGREAGRDSR
ALSPERRDAL AAEWHALDAQ LALRRQELAG NSGLIDLGLA RQELARLQLA RLEEAARALQ
DAISRQRASQ AEQTVQALAD VSADASHDDL LAREAAINQQ LSEYLLGATE KLDALTRRNQ
AVSQQLDMLN RSTTLIDEQI GVLQGSVLLS RILLEQRRAL PAPTTDAGLA DQIADIRLYQ
FEINKQREQL SIPAAHAERL LADAGEADPA VREPLLALLA TRSELLERLN RELNAVLAQS
ITLQLAERQL LVSADRLRAT LDKQMFWIPS NRPLDLAWLQ AVPAALAKQF AAIPWGSAVG
ELWAGLQARP FLFLPVLLLS VGLFARRRWL RAQLDSLHAD IGYVRRDSQL HTPRAILLNM
LLTLPVSLLL ALGGIALQMD ARGQNAALGA ALMDMAQAWL VFRTAHRLLT PGGVAERHFQ
WPVERVRALH RNLNKLGLVV VAVVAVVAIA ERQPESLGID VLGILILLVG YATMAWLLVR
GLLHTRLEDR PSPLRVFVGL ALGLMPLALI GALVMGYYYT ALKLTGRLVD TLYVLILWRL
AEGLLVRALG VAAHRIDHQR AVARREAAER EGRAGADSEP AAVAEAPMLD IARINQQSLR
LLHLALLSGL AVALYWVWAD LLTVVSYLDN ITLYEYASGS GETAGVVPIS LADLLGALAI
AAIAFMLATN LPGLLEVLVL SRLQLAQGSA YAITTLLSYV IVGVGIASTL GTLGVSWDKL
QWLVAALSVG LGFGLQEIFA NFVSGLIILF ERPLRIGDVV TIGNVSGTVS RIQIRATTIT
DFDRKEMIVP NKAFITGQLT NWSLTDTVTR VTIKLGVAYG ADLETTRRLL LAIAAENARV
LKDPEPLVFF LNFGPSTLDH ELRVHVRELG DRNAAIDEIN REIDRRFREA GIEIAFNQMD
VHIRSIADGR EALLQQTAVT PPAGSPGQQG